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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183508420
OMHD01001030
285875
Actinomycetota
TAC
Val
>WENV183508506
OMHD01008594
351841
Actinomycetota
TGC
Ala
>WENV183508518
OMHD01010114
180084
Actinomycetota
CAT
Met
>WENV183508471
OMHD01004842
74117
Actinomycetota
CAG
Leu
>WENV183508485
OMHD01006423
484727
Actinomycetota
CCC
Gly
>WENV183508500
OMHD01007274
194706
Actinomycetota
CAT
Met
>WENV183508494
OMHD01007080
284890
Actinomycetota
CTT
Lys
>WENV183508429
OMHD01001451
401853
Actinomycetota
GTT
Asn
>WENV183508499
OMHD01007249
30089
Actinomycetota
GCT
Ser
>WENV183508474
OMHD01004969
481757
Actinomycetota
GCA
Cys
>WENV183508435
OMHD01001900
312253
Actinomycetota
TGC
Ala
>WENV183508403
OMHD01000219
221845
Actinomycetota
GAT
Ile
>WENV183508490
OMHD01006913
399188
Actinomycetota
CAT
Met
>WENV183508491
OMHD01006913
287437
Actinomycetota
CCA
Trp
>WENV183508451
OMHD01002892
131892
Actinomycetota
GTA
Tyr
>WENV183508488
OMHD01006652
187640
Actinomycetota
TGT
Thr
>WENV183508492
OMHD01007045
284887
Actinomycetota
GCC
Gly
>WENV183508489
OMHD01006913
280979
Actinomycetota
GGT
Thr
>WENV183508462
OMHD01004240
371116
Actinomycetota
GGC
Ala
>WENV183508508
OMHD01008711
176317
Actinomycetota
GAT
Ile
>WENV183508424
OMHD01001127
46947
Actinomycetota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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