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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183510427
OMHO01001392
285875
Actinomycetota
TAC
Val
>WENV183510449
OMHO01002433
351841
Actinomycetota
TGC
Ala
>WENV183510469
OMHO01003790
74117
Actinomycetota
CAG
Leu
>WENV183510390
OMHO01000355
194706
Actinomycetota
CAT
Met
>WENV183510474
OMHO01004098
46948
Actinomycetota
>WENV183510530
OMHO01009938
284890
Actinomycetota
CTT
Lys
>WENV183510408
OMHO01000697
401853
Actinomycetota
GTT
Asn
>WENV183510378
OMHO01000029
434575
Actinomycetota
CTG
Gln
>WENV183510539
OMHO01010846
180946
Actinomycetota
TTT
Lys
>WENV183510402
OMHO01000626
284889
Actinomycetota
CTC
Glu
>WENV183510420
OMHO01000999
401852
Actinomycetota
TTG
Gln
>WENV183510417
OMHO01000878
184493
Actinomycetota
GGG
Pro
>WENV183510522
OMHO01008788
401184
Actinomycetota
CAT
Met
>WENV183510525
OMHO01009609
331024
Actinomycetota
CTT
Lys
>WENV183510457
OMHO01002578
285880
Actinomycetota
TCT
Arg
>WENV183510441
OMHO01001634
47453
Actinomycetota
GAG
Leu
>WENV183510400
OMHO01000626
481757
Actinomycetota
GCA
Cys
>WENV183510467
OMHO01003685
285876
Actinomycetota
CGT
Thr
>WENV183510423
OMHO01001139
180944
Actinomycetota
GTC
Asp
>WENV183510394
OMHO01000494
20643
Actinomycetota
GAG
Leu
>WENV183510379
OMHO01000029
285873
Actinomycetota
CTC
Glu
>WENV183510380
OMHO01000029
285873
Actinomycetota
CTC
Glu
>WENV183510382
OMHO01000126
507958
Actinomycetota
CCC
Gly
>WENV183510465
OMHO01003484
370866
Actinomycetota
GTG
His
>WENV183510439
OMHO01001492
221845
Actinomycetota
GAT
Ile
>WENV183510405
OMHO01000675
118693
Actinomycetota
GTA
Tyr
>WENV183510422
OMHO01001139
343259
Actinomycetota
TTC
Glu
>WENV183510411
OMHO01000767
285877
Actinomycetota
CCG
Arg
>WENV183510502
OMHO01007130
186868
Actinomycetota
CAA
Leu
>WENV183510501
OMHO01007107
187640
Actinomycetota
TGT
Thr
>WENV183510407
OMHO01000675
180945
Actinomycetota
CAT
Met
>WENV183510386
OMHO01000279
285879
Actinomycetota
GTG
His
>WENV183510404
OMHO01000626
293249
Actinomycetota
CAC
Val
>WENV183510536
OMHO01010630
197533
Actinomycetota
CAT
Met
>WENV183510521
OMHO01008788
280979
Actinomycetota
GGT
Thr
>WENV183510458
OMHO01002697
371116
Actinomycetota
GGC
Ala
>WENV183510448
OMHO01002236
46947
Actinomycetota
TGA
Ser
>WENV183510523
OMHO01008788
281005
Actinomycetota
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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