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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183511213
OMIB01000238
285875
Actinomycetota
TAC
Val
>WENV183511228
OMIB01001063
351841
Actinomycetota
TGC
Ala
>WENV183511243
OMIB01003608
449634
Actinomycetota
CTG
Gln
>WENV183511194
OMIB01000020
74117
Actinomycetota
CAG
Leu
>WENV183511267
OMIB01008074
31036
Actinomycetota
GCT
Ser
>WENV183511190
OMIB01000008
401853
Actinomycetota
GTT
Asn
>WENV183511207
OMIB01000178
434575
Actinomycetota
CTG
Gln
>WENV183511197
OMIB01000058
180946
Actinomycetota
TTT
Lys
>WENV183511233
OMIB01001844
285874
Actinomycetota
TGT
Thr
>WENV183511241
OMIB01003246
30089
Actinomycetota
GCT
Ser
>WENV183511278
OMIB01010185
73081
Actinomycetota
CAG
Leu
>WENV183511216
OMIB01000273
401852
Actinomycetota
TTG
Gln
>WENV183511211
OMIB01000212
184493
Actinomycetota
GGG
Pro
>WENV183511220
OMIB01000412
331024
Actinomycetota
CTT
Lys
>WENV183511199
OMIB01000071
285880
Actinomycetota
TCT
Arg
>WENV183511217
OMIB01000279
481757
Actinomycetota
GCA
Cys
>WENV183511277
OMIB01009405
280986
Actinomycetota
GAA
Phe
>WENV183511192
OMIB01000014
285876
Actinomycetota
CGT
Thr
>WENV183511225
OMIB01000770
180944
Actinomycetota
GTC
Asp
>WENV183511193
OMIB01000018
20643
Actinomycetota
GAG
Leu
>WENV183511208
OMIB01000178
285873
Actinomycetota
CTC
Glu
>WENV183511209
OMIB01000178
285873
Actinomycetota
CTC
Glu
>WENV183511223
OMIB01000508
507958
Actinomycetota
CCC
Gly
>WENV183511264
OMIB01007901
186871
Actinomycetota
CTT
Lys
>WENV183511219
OMIB01000386
221845
Actinomycetota
GAT
Ile
>WENV183511201
OMIB01000090
481756
Actinomycetota
TCC
Gly
>WENV183511246
OMIB01004810
118693
Actinomycetota
GTA
Tyr
>WENV183511202
OMIB01000090
180943
Actinomycetota
TGG
Pro
>WENV183511210
OMIB01000188
285877
Actinomycetota
CCG
Arg
>WENV183511227
OMIB01000924
186868
Actinomycetota
CAA
Leu
>WENV183511205
OMIB01000105
180945
Actinomycetota
CAT
Met
>WENV183511235
OMIB01002141
285879
Actinomycetota
GTG
His
>WENV183511244
OMIB01003608
302285
Actinomycetota
CTC
Glu
>WENV183511195
OMIB01000040
371116
Actinomycetota
GGC
Ala
>WENV183511222
OMIB01000415
46947
Actinomycetota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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