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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
85 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183527329
ONZW01000244
179231
Actinomycetota
TAC
Val
>WENV183527556
ONZW01000891
176499
Actinomycetota
CAT
Met
>WENV183527587
ONZW01001035
176499
Actinomycetota
CAT
Met
>WENV183527384
ONZW01000369
175907
Actinomycetota
TAC
Val
>WENV183527468
ONZW01000599
283311
Actinomycetota
CCT
Arg
>WENV183527448
ONZW01000521
147806
Actinomycetota
TAA
Leu
>WENV183527449
ONZW01000525
280498
Actinomycetota
GTT
Asn
>WENV183527450
ONZW01000525
280498
Actinomycetota
GTT
Asn
>WENV183527451
ONZW01000525
280498
Actinomycetota
GTT
Asn
>WENV183527452
ONZW01000525
280498
Actinomycetota
GTT
Asn
>WENV183527453
ONZW01000525
280498
Actinomycetota
GTT
Asn
>WENV183527531
ONZW01000758
280498
Actinomycetota
GTT
Asn
>WENV183527630
ONZW01001323
295964
Actinomycetota
GTT
Asn
>WENV183527605
ONZW01001127
56083
Actinomycetota
CGA
Ser
>WENV183527241
ONZW01000161
140768
Actinomycetota
TAG
Leu
>WENV183527457
ONZW01000557
140768
Actinomycetota
TAG
Leu
>WENV183527493
ONZW01000672
56384
Actinomycetota
TGA
Ser
>WENV183527360
ONZW01000314
176075
Actinomycetota
TCT
Arg
>WENV183527470
ONZW01000606
176075
Actinomycetota
TCT
Arg
>WENV183527381
ONZW01000358
175848
Actinomycetota
TGG
Pro
>WENV183527382
ONZW01000359
176078
Actinomycetota
GGG
Pro
>WENV183527375
ONZW01000350
176078
Actinomycetota
GGG
Pro
>WENV183527481
ONZW01000634
20208
Actinomycetota
GAG
Leu
>WENV183527379
ONZW01000358
482604
Actinomycetota
TTG
Gln
>WENV183527669
ONZW01001602
482604
Actinomycetota
TTG
Gln
>WENV183527141
ONZW01000049
59689
Actinomycetota
GGA
Ser
>WENV183527378
ONZW01000357
59689
Actinomycetota
GGA
Ser
>WENV183527199
ONZW01000101
175837
Actinomycetota
ACG
Arg
>WENV183527485
ONZW01000646
175837
Actinomycetota
ACG
Arg
>WENV183527486
ONZW01000646
175837
Actinomycetota
ACG
Arg
>WENV183527255
ONZW01000168
29393
Actinomycetota
GCT
Ser
>WENV183527551
ONZW01000824
280549
Actinomycetota
CAC
Val
>WENV183527578
ONZW01000985
24925
Actinomycetota
GCT
Ser
>WENV183527466
ONZW01000589
56383
Actinomycetota
CGA
Ser
>WENV183527380
ONZW01000358
280702
Actinomycetota
GGC
Ala
>WENV183527349
ONZW01000284
140878
Actinomycetota
TAA
Leu
>WENV183527550
ONZW01000824
434162
Actinomycetota
GAC
Val
>WENV183527307
ONZW01000222
176077
Actinomycetota
CAT
Met
>WENV183527649
ONZW01001458
283312
Actinomycetota
GTG
His
>WENV183527502
ONZW01000701
176638
Actinomycetota
GGG
Pro
>WENV183527262
ONZW01000172
280524
Actinomycetota
TGC
Ala
>WENV183527634
ONZW01001368
283313
Actinomycetota
CCG
Arg
>WENV183527234
ONZW01000157
398948
Actinomycetota
TTC
Glu
>WENV183527688
ONZW01001754
398948
Actinomycetota
TTC
Glu
>WENV183527271
ONZW01000183
150272
Actinomycetota
TAA
Leu
>WENV183527253
ONZW01000168
117777
Actinomycetota
>WENV183527586
ONZW01001035
117777
Actinomycetota
>WENV183527263
ONZW01000172
280523
Actinomycetota
GGC
Ala
>WENV183527530
ONZW01000758
280523
Actinomycetota
GGC
Ala
>WENV183527670
ONZW01001602
280523
Actinomycetota
GGC
Ala
>WENV183527254
ONZW01000168
175949
Actinomycetota
CAT
Met
>WENV183527682
ONZW01001692
227544
Actinomycetota
TAC
Val
>WENV183527225
ONZW01000151
176555
Actinomycetota
CAT
Met
>WENV183527557
ONZW01000893
191955
Actinomycetota
TGT
Thr
>WENV183527714
ONZW01002186
20415
Actinomycetota
GAG
Leu
>WENV183527645
ONZW01001446
280544
Actinomycetota
GTG
His
>WENV183527458
ONZW01000557
280496
Actinomycetota
CGT
Thr
>WENV183527539
ONZW01000788
280703
Actinomycetota
CCT
Arg
>WENV183527626
ONZW01001266
140879
Actinomycetota
TAG
Leu
>WENV183527477
ONZW01000620
178569
Actinomycetota
CAT
Met
>WENV183527495
ONZW01000679
280450
Actinomycetota
TTT
Lys
>WENV183527456
ONZW01000557
323758
Actinomycetota
CGT
Thr
>WENV183527338
ONZW01000253
56166
Actinomycetota
TGA
Ser
>WENV183527310
ONZW01000226
480329
Actinomycetota
CCC
Gly
>WENV183527658
ONZW01001505
480329
Actinomycetota
CCC
Gly
>WENV183527866
ONZW01006771
175882
Actinomycetota
TGG
Pro
>WENV183527585
ONZW01001029
222475
Actinomycetota
CTT
Lys
>WENV183527236
ONZW01000159
280499
Actinomycetota
CCT
Arg
>WENV183527143
ONZW01000049
398853
Actinomycetota
CTG
Gln
>WENV183527266
ONZW01000177
398853
Actinomycetota
CTG
Gln
>WENV183527447
ONZW01000517
176642
Actinomycetota
CAA
Leu
>WENV183527602
ONZW01001116
175843
Actinomycetota
CAA
Leu
>WENV183527643
ONZW01001438
175843
Actinomycetota
CAA
Leu
>WENV183527802
ONZW01004076
203883
Actinomycetota
TCT
Arg
>WENV183527472
ONZW01000611
56075
Actinomycetota
TGA
Ser
>WENV183527579
ONZW01000997
46642
Actinomycetota
CGA
Ser
>WENV183527311
ONZW01000226
104211
Actinomycetota
CAG
Leu
>WENV183527353
ONZW01000304
317680
Actinomycetota
CCG
Arg
>WENV183527548
ONZW01000824
317680
Actinomycetota
CCG
Arg
>WENV183527142
ONZW01000049
289788
Actinomycetota
CTC
Glu
>WENV183527555
ONZW01000891
117903
Actinomycetota
GTA
Tyr
>WENV183527680
ONZW01001670
179238
Actinomycetota
GAT
Ile
>WENV183527240
ONZW01000161
280470
Actinomycetota
CGT
Thr
>WENV183527625
ONZW01001266
280470
Actinomycetota
CGT
Thr
>WENV183527737
ONZW01002534
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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