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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183533760
OOAE01002114
179231
Actinomycetota
TAC
Val
>WENV183533279
OOAE01000205
176499
Actinomycetota
CAT
Met
>WENV183533712
OOAE01001530
280498
Actinomycetota
GTT
Asn
>WENV183533544
OOAE01000828
140768
Actinomycetota
TAG
Leu
>WENV183533538
OOAE01000796
175837
Actinomycetota
ACG
Arg
>WENV183534345
OOAE01065835
398843
Actinomycetota
GTT
Asn
>WENV183533786
OOAE01002239
176638
Actinomycetota
GGG
Pro
>WENV183533683
OOAE01001413
280524
Actinomycetota
TGC
Ala
>WENV183533965
OOAE01004875
291585
Actinomycetota
GCC
Gly
>WENV183534268
OOAE01042110
150272
Actinomycetota
TAA
Leu
>WENV183533684
OOAE01001413
280523
Actinomycetota
GGC
Ala
>WENV183533438
OOAE01000540
176555
Actinomycetota
CAT
Met
>WENV183533752
OOAE01002037
175841
Actinomycetota
TAT
Ile
>WENV183534141
OOAE01015835
280536
Actinomycetota
CTT
Lys
>WENV183534142
OOAE01015835
280536
Actinomycetota
CTT
Lys
>WENV183534051
OOAE01008958
175872
Actinomycetota
GTC
Asp
>WENV183533280
OOAE01000205
20205
Actinomycetota
GCT
Ser
>WENV183533250
OOAE01000169
280450
Actinomycetota
TTT
Lys
>WENV183533602
OOAE01001030
480329
Actinomycetota
CCC
Gly
>WENV183534048
OOAE01008845
483206
Actinomycetota
CTG
Gln
>WENV183533431
OOAE01000513
175882
Actinomycetota
TGG
Pro
>WENV183533771
OOAE01002174
20209
Actinomycetota
GAG
Leu
>WENV183533800
OOAE01002473
480319
Actinomycetota
TTG
Gln
>WENV183533295
OOAE01000230
280489
Actinomycetota
CTC
Glu
>WENV183533615
OOAE01001115
280499
Actinomycetota
CCT
Arg
>WENV183533296
OOAE01000230
398853
Actinomycetota
CTG
Gln
>WENV183533430
OOAE01000513
175843
Actinomycetota
CAA
Leu
>WENV183533693
OOAE01001437
203883
Actinomycetota
TCT
Arg
>WENV183533971
OOAE01005037
46642
Actinomycetota
CGA
Ser
>WENV183533601
OOAE01001030
104211
Actinomycetota
CAG
Leu
>WENV183533840
OOAE01002985
317680
Actinomycetota
CCG
Arg
>WENV183533278
OOAE01000205
117903
Actinomycetota
GTA
Tyr
>WENV183533745
OOAE01001900
56071
Actinomycetota
TGA
Ser
>WENV183533573
OOAE01000961
147796
Actinomycetota
TAA
Leu
>WENV183533543
OOAE01000828
280470
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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