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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183542654
OOAM01014444
179231
Actinomycetota
TAC
Val
>WENV183541984
OOAM01000368
176499
Actinomycetota
CAT
Met
>WENV183542197
OOAM01001066
147806
Actinomycetota
TAA
Leu
>WENV183542371
OOAM01002822
280498
Actinomycetota
GTT
Asn
>WENV183542430
OOAM01003719
280498
Actinomycetota
GTT
Asn
>WENV183542358
OOAM01002630
140768
Actinomycetota
TAG
Leu
>WENV183542542
OOAM01006716
175837
Actinomycetota
ACG
Arg
>WENV183542685
OOAM01017252
280549
Actinomycetota
CAC
Val
>WENV183542009
OOAM01000414
280441
Actinomycetota
CCG
Arg
>WENV183542274
OOAM01001549
176638
Actinomycetota
GGG
Pro
>WENV183542440
OOAM01003821
280524
Actinomycetota
TGC
Ala
>WENV183542478
OOAM01004659
176723
Actinomycetota
TCT
Arg
>WENV183542506
OOAM01005679
280523
Actinomycetota
GGC
Ala
>WENV183541866
OOAM01000155
176555
Actinomycetota
CAT
Met
>WENV183542225
OOAM01001235
280450
Actinomycetota
TTT
Lys
>WENV183542355
OOAM01002618
56166
Actinomycetota
TGA
Ser
>WENV183541913
OOAM01000219
480329
Actinomycetota
CCC
Gly
>WENV183542100
OOAM01000672
175882
Actinomycetota
TGG
Pro
>WENV183542300
OOAM01001745
480319
Actinomycetota
TTG
Gln
>WENV183542354
OOAM01002606
280499
Actinomycetota
CCT
Arg
>WENV183542133
OOAM01000799
398853
Actinomycetota
CTG
Gln
>WENV183542493
OOAM01005158
176642
Actinomycetota
CAA
Leu
>WENV183542288
OOAM01001638
46642
Actinomycetota
CGA
Ser
>WENV183541912
OOAM01000219
104211
Actinomycetota
CAG
Leu
>WENV183541983
OOAM01000368
117903
Actinomycetota
GTA
Tyr
>WENV183542357
OOAM01002630
280470
Actinomycetota
CGT
Thr
>WENV183542773
OOAM01039622
280470
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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