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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183545625
OOAQ01010988
235153
Actinomycetota
CCT
Arg
>WENV183545667
OOAQ01014181
201717
Actinomycetota
CTT
Lys
>WENV183545748
OOAQ01025149
23370
Actinomycetota
GCT
Ser
>WENV183545831
OOAQ01046920
356045
Actinomycetota
GAC
Val
>WENV183545836
OOAQ01050319
44862
Actinomycetota
CGA
Ser
>WENV183545797
OOAQ01037328
254857
Actinomycetota
CCG
Arg
>WENV183545822
OOAQ01044060
144700
Actinomycetota
CAT
Met
>WENV183545511
OOAQ01005418
144636
Actinomycetota
GAT
Ile
>WENV183545835
OOAQ01048605
338148
Actinomycetota
CTG
Gln
>WENV183545896
OOAQ01079040
145347
Actinomycetota
CAA
Leu
>WENV183545560
OOAQ01007517
338139
Actinomycetota
GTT
Asn
>WENV183545877
OOAQ01068977
163764
Actinomycetota
TGG
Pro
>WENV183545843
OOAQ01053248
235121
Actinomycetota
CGT
Thr
>WENV183545650
OOAQ01013029
144660
Actinomycetota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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