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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
64 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183552898
OOBK01000016
176499
Actinomycetota
CAT
Met
>WENV183553360
OOBK01003083
175883
Actinomycetota
GAT
Ile
>WENV183552911
OOBK01000022
175907
Actinomycetota
TAC
Val
>WENV183552940
OOBK01000062
147806
Actinomycetota
TAA
Leu
>WENV183553045
OOBK01000290
280498
Actinomycetota
GTT
Asn
>WENV183553082
OOBK01000411
280498
Actinomycetota
GTT
Asn
>WENV183553441
OOBK01004534
280503
Actinomycetota
CCT
Arg
>WENV183552866
OOBK01000003
295964
Actinomycetota
GTT
Asn
>WENV183553343
OOBK01002639
56083
Actinomycetota
CGA
Ser
>WENV183552864
OOBK01000002
140768
Actinomycetota
TAG
Leu
>WENV183552901
OOBK01000018
140768
Actinomycetota
TAG
Leu
>WENV183552963
OOBK01000103
176075
Actinomycetota
TCT
Arg
>WENV183552994
OOBK01000174
175848
Actinomycetota
TGG
Pro
>WENV183552868
OOBK01000004
176078
Actinomycetota
GGG
Pro
>WENV183552869
OOBK01000004
20208
Actinomycetota
GAG
Leu
>WENV183553022
OOBK01000232
175837
Actinomycetota
ACG
Arg
>WENV183553189
OOBK01001040
175837
Actinomycetota
ACG
Arg
>WENV183552951
OOBK01000080
29393
Actinomycetota
GCT
Ser
>WENV183552905
OOBK01000018
280549
Actinomycetota
CAC
Val
>WENV183553207
OOBK01001253
349164
Actinomycetota
CTC
Glu
>WENV183552993
OOBK01000174
280702
Actinomycetota
GGC
Ala
>WENV183552908
OOBK01000019
176077
Actinomycetota
CAT
Met
>WENV183553492
OOBK01007398
241064
Actinomycetota
CTC
Glu
>WENV183553038
OOBK01000266
176638
Actinomycetota
GGG
Pro
>WENV183552889
OOBK01000011
280524
Actinomycetota
TGC
Ala
>WENV183553531
OOBK01009591
176723
Actinomycetota
TCT
Arg
>WENV183553520
OOBK01008692
291585
Actinomycetota
GCC
Gly
>WENV183552890
OOBK01000013
150272
Actinomycetota
TAA
Leu
>WENV183552949
OOBK01000080
117777
Actinomycetota
>WENV183553046
OOBK01000290
280523
Actinomycetota
GGC
Ala
>WENV183552950
OOBK01000080
175949
Actinomycetota
CAT
Met
>WENV183553005
OOBK01000207
176555
Actinomycetota
CAT
Met
>WENV183552885
OOBK01000011
191955
Actinomycetota
TGT
Thr
>WENV183552964
OOBK01000103
280544
Actinomycetota
GTG
His
>WENV183553556
OOBK01011988
280536
Actinomycetota
CTT
Lys
>WENV183552902
OOBK01000018
280496
Actinomycetota
CGT
Thr
>WENV183552909
OOBK01000019
280703
Actinomycetota
CCT
Arg
>WENV183553570
OOBK01013592
175926
Actinomycetota
CAT
Met
>WENV183552865
OOBK01000002
280450
Actinomycetota
TTT
Lys
>WENV183552900
OOBK01000018
323758
Actinomycetota
CGT
Thr
>WENV183553000
OOBK01000196
56166
Actinomycetota
TGA
Ser
>WENV183553061
OOBK01000328
358727
Actinomycetota
CCG
Arg
>WENV183553121
OOBK01000637
358727
Actinomycetota
CCG
Arg
>WENV183553270
OOBK01001696
480329
Actinomycetota
CCC
Gly
>WENV183553491
OOBK01007398
483206
Actinomycetota
CTG
Gln
>WENV183552884
OOBK01000010
175882
Actinomycetota
TGG
Pro
>WENV183552887
OOBK01000011
99865
Actinomycetota
CAG
Leu
>WENV183552983
OOBK01000145
222475
Actinomycetota
CTT
Lys
>WENV183552988
OOBK01000169
480319
Actinomycetota
TTG
Gln
>WENV183552958
OOBK01000092
280499
Actinomycetota
CCT
Arg
>WENV183552862
OOBK01000002
398853
Actinomycetota
CTG
Gln
>WENV183553208
OOBK01001253
398853
Actinomycetota
CTG
Gln
>WENV183552941
OOBK01000062
176642
Actinomycetota
CAA
Leu
>WENV183552891
OOBK01000013
175843
Actinomycetota
CAA
Leu
>WENV183552939
OOBK01000061
237585
Actinomycetota
TAC
Val
>WENV183553051
OOBK01000311
203883
Actinomycetota
TCT
Arg
>WENV183552956
OOBK01000089
56075
Actinomycetota
TGA
Ser
>WENV183553377
OOBK01003270
46642
Actinomycetota
CGA
Ser
>WENV183552998
OOBK01000194
104211
Actinomycetota
CAG
Leu
>WENV183552897
OOBK01000016
117903
Actinomycetota
GTA
Tyr
>WENV183552888
OOBK01000011
179238
Actinomycetota
GAT
Ile
>WENV183552992
OOBK01000174
506175
Actinomycetota
TTG
Gln
>WENV183552863
OOBK01000002
280470
Actinomycetota
CGT
Thr
>WENV183552886
OOBK01000011
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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