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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
97 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183560691
OOBU01000390
176499
Actinomycetota
CAT
Met
>WENV183560962
OOBU01003232
176499
Actinomycetota
CAT
Met
>WENV183560519
OOBU01000067
175907
Actinomycetota
TAC
Val
>WENV183560728
OOBU01000524
283311
Actinomycetota
CCT
Arg
>WENV183560753
OOBU01000612
147806
Actinomycetota
TAA
Leu
>WENV183560864
OOBU01001582
280498
Actinomycetota
GTT
Asn
>WENV183560865
OOBU01001582
280498
Actinomycetota
GTT
Asn
>WENV183560867
OOBU01001593
280498
Actinomycetota
GTT
Asn
>WENV183560895
OOBU01001965
280498
Actinomycetota
GTT
Asn
>WENV183560968
OOBU01003493
280498
Actinomycetota
GTT
Asn
>WENV183560806
OOBU01000858
295964
Actinomycetota
GTT
Asn
>WENV183560785
OOBU01000772
459899
Actinomycetota
TTC
Glu
>WENV183560761
OOBU01000640
56083
Actinomycetota
CGA
Ser
>WENV183560670
OOBU01000330
140768
Actinomycetota
TAG
Leu
>WENV183561032
OOBU01008609
56384
Actinomycetota
TGA
Ser
>WENV183560744
OOBU01000578
176075
Actinomycetota
TCT
Arg
>WENV183560898
OOBU01002035
176075
Actinomycetota
TCT
Arg
>WENV183560973
OOBU01003653
175848
Actinomycetota
TGG
Pro
>WENV183560665
OOBU01000317
176078
Actinomycetota
GGG
Pro
>WENV183560866
OOBU01001585
176078
Actinomycetota
GGG
Pro
>WENV183560617
OOBU01000208
59689
Actinomycetota
GGA
Ser
>WENV183560674
OOBU01000352
175837
Actinomycetota
ACG
Arg
>WENV183560675
OOBU01000352
175837
Actinomycetota
ACG
Arg
>WENV183560827
OOBU01001085
175837
Actinomycetota
ACG
Arg
>WENV183560876
OOBU01001739
175837
Actinomycetota
ACG
Arg
>WENV183560908
OOBU01002279
175837
Actinomycetota
ACG
Arg
>WENV183560978
OOBU01003983
175837
Actinomycetota
ACG
Arg
>WENV183560607
OOBU01000195
29393
Actinomycetota
GCT
Ser
>WENV183560615
OOBU01000206
280549
Actinomycetota
CAC
Val
>WENV183560663
OOBU01000317
380862
Actinomycetota
CAC
Val
>WENV183561004
OOBU01006063
380862
Actinomycetota
CAC
Val
>WENV183560546
OOBU01000109
349164
Actinomycetota
CTC
Glu
>WENV183560698
OOBU01000407
56383
Actinomycetota
CGA
Ser
>WENV183561006
OOBU01006070
280441
Actinomycetota
CCG
Arg
>WENV183560936
OOBU01002597
280702
Actinomycetota
GGC
Ala
>WENV183560937
OOBU01002597
280702
Actinomycetota
GGC
Ala
>WENV183560587
OOBU01000162
176077
Actinomycetota
CAT
Met
>WENV183560831
OOBU01001152
283312
Actinomycetota
GTG
His
>WENV183560697
OOBU01000404
21508
Actinomycetota
GAG
Leu
>WENV183560835
OOBU01001181
280524
Actinomycetota
TGC
Ala
>WENV183560999
OOBU01005771
280524
Actinomycetota
TGC
Ala
>WENV183560752
OOBU01000602
283313
Actinomycetota
CCG
Arg
>WENV183560727
OOBU01000507
398948
Actinomycetota
TTC
Glu
>WENV183560963
OOBU01003292
398948
Actinomycetota
TTC
Glu
>WENV183560509
OOBU01000061
150272
Actinomycetota
TAA
Leu
>WENV183560605
OOBU01000195
117777
Actinomycetota
>WENV183560690
OOBU01000390
117777
Actinomycetota
>WENV183560718
OOBU01000465
280523
Actinomycetota
GGC
Ala
>WENV183560836
OOBU01001181
280523
Actinomycetota
GGC
Ala
>WENV183561005
OOBU01006063
280523
Actinomycetota
GGC
Ala
>WENV183561030
OOBU01008246
280523
Actinomycetota
GGC
Ala
>WENV183560606
OOBU01000195
175949
Actinomycetota
CAT
Met
>WENV183560805
OOBU01000857
227544
Actinomycetota
TAC
Val
>WENV183560771
OOBU01000736
176555
Actinomycetota
CAT
Met
>WENV183560558
OOBU01000117
191955
Actinomycetota
TGT
Thr
>WENV183560952
OOBU01003015
20415
Actinomycetota
GAG
Leu
>WENV183560621
OOBU01000219
280544
Actinomycetota
GTG
His
>WENV183560671
OOBU01000330
280496
Actinomycetota
CGT
Thr
>WENV183560595
OOBU01000181
280703
Actinomycetota
CCT
Arg
>WENV183560993
OOBU01005232
140879
Actinomycetota
TAG
Leu
>WENV183560815
OOBU01000956
20205
Actinomycetota
GCT
Ser
>WENV183560804
OOBU01000838
178569
Actinomycetota
CAT
Met
>WENV183560729
OOBU01000527
280450
Actinomycetota
TTT
Lys
>WENV183560614
OOBU01000206
468141
Actinomycetota
GAC
Val
>WENV183560662
OOBU01000317
468141
Actinomycetota
GAC
Val
>WENV183560944
OOBU01002778
468141
Actinomycetota
GAC
Val
>WENV183560669
OOBU01000330
323758
Actinomycetota
CGT
Thr
>WENV183560830
OOBU01001149
56166
Actinomycetota
TGA
Ser
>WENV183560557
OOBU01000116
358727
Actinomycetota
CCG
Arg
>WENV183560778
OOBU01000753
358727
Actinomycetota
CCG
Arg
>WENV183560654
OOBU01000297
480329
Actinomycetota
CCC
Gly
>WENV183560871
OOBU01001696
480329
Actinomycetota
CCC
Gly
>WENV183560852
OOBU01001425
175882
Actinomycetota
TGG
Pro
>WENV183560572
OOBU01000130
99865
Actinomycetota
CAG
Leu
>WENV183560814
OOBU01000930
99865
Actinomycetota
CAG
Leu
>WENV183560747
OOBU01000591
222475
Actinomycetota
CTT
Lys
>WENV183560920
OOBU01002485
222475
Actinomycetota
CTT
Lys
>WENV183560754
OOBU01000622
480319
Actinomycetota
TTG
Gln
>WENV183560833
OOBU01001180
280499
Actinomycetota
CCT
Arg
>WENV183560907
OOBU01002266
280499
Actinomycetota
CCT
Arg
>WENV183560547
OOBU01000109
398853
Actinomycetota
CTG
Gln
>WENV183560904
OOBU01002213
398853
Actinomycetota
CTG
Gln
>WENV183561007
OOBU01006130
176642
Actinomycetota
CAA
Leu
>WENV183560735
OOBU01000559
175843
Actinomycetota
CAA
Leu
>WENV183560832
OOBU01001161
175843
Actinomycetota
CAA
Leu
>WENV183560872
OOBU01001717
203883
Actinomycetota
TCT
Arg
>WENV183560646
OOBU01000271
56075
Actinomycetota
TGA
Ser
>WENV183560863
OOBU01001579
46642
Actinomycetota
CGA
Ser
>WENV183560909
OOBU01002354
46642
Actinomycetota
CGA
Ser
>WENV183560961
OOBU01003232
117903
Actinomycetota
GTA
Tyr
>WENV183560840
OOBU01001292
56071
Actinomycetota
TGA
Ser
>WENV183560998
OOBU01005771
179238
Actinomycetota
GAT
Ile
>WENV183560857
OOBU01001522
147796
Actinomycetota
TAA
Leu
>WENV183560719
OOBU01000465
506175
Actinomycetota
TTG
Gln
>WENV183560935
OOBU01002597
506175
Actinomycetota
TTG
Gln
>WENV183560992
OOBU01005232
280470
Actinomycetota
CGT
Thr
>WENV183560571
OOBU01000130
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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