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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183564401
OOBY01007556
176499
Actinomycetota
CAT
Met
>WENV183564478
OOBY01018254
147806
Actinomycetota
TAA
Leu
>WENV183564548
OOBY01036107
316729
Actinomycetota
CAC
Val
>WENV183564405
OOBY01008060
59689
Actinomycetota
GGA
Ser
>WENV183564547
OOBY01036107
434162
Actinomycetota
GAC
Val
>WENV183564447
OOBY01015508
280524
Actinomycetota
TGC
Ala
>WENV183564482
OOBY01019231
191955
Actinomycetota
TGT
Thr
>WENV183564536
OOBY01032558
358727
Actinomycetota
CCG
Arg
>WENV183564398
OOBY01007412
280489
Actinomycetota
CTC
Glu
>WENV183564535
OOBY01032177
280499
Actinomycetota
CCT
Arg
>WENV183564399
OOBY01007412
398853
Actinomycetota
CTG
Gln
>WENV183564487
OOBY01021327
237585
Actinomycetota
TAC
Val
>WENV183564443
OOBY01014191
46642
Actinomycetota
CGA
Ser
>WENV183564400
OOBY01007556
117903
Actinomycetota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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