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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
109 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183567038
OOCB01000140
176499
Actinomycetota
CAT
Met
>WENV183567102
OOCB01000171
176499
Actinomycetota
CAT
Met
>WENV183567465
OOCB01000521
175883
Actinomycetota
GAT
Ile
>WENV183567467
OOCB01000521
175883
Actinomycetota
GAT
Ile
>WENV183567760
OOCB01000963
175907
Actinomycetota
TAC
Val
>WENV183567032
OOCB01000134
283311
Actinomycetota
CCT
Arg
>WENV183567783
OOCB01001031
147806
Actinomycetota
TAA
Leu
>WENV183567411
OOCB01000472
280498
Actinomycetota
GTT
Asn
>WENV183567413
OOCB01000472
280498
Actinomycetota
GTT
Asn
>WENV183568263
OOCB01002583
280498
Actinomycetota
GTT
Asn
>WENV183568900
OOCB01008873
280498
Actinomycetota
GTT
Asn
>WENV183567746
OOCB01000938
280503
Actinomycetota
CCT
Arg
>WENV183567384
OOCB01000441
295964
Actinomycetota
GTT
Asn
>WENV183567654
OOCB01000773
459899
Actinomycetota
TTC
Glu
>WENV183568512
OOCB01003866
56083
Actinomycetota
CGA
Ser
>WENV183566963
OOCB01000087
140768
Actinomycetota
TAG
Leu
>WENV183567315
OOCB01000377
56384
Actinomycetota
TGA
Ser
>WENV183567316
OOCB01000378
176075
Actinomycetota
TCT
Arg
>WENV183567485
OOCB01000539
176075
Actinomycetota
TCT
Arg
>WENV183566901
OOCB01000052
176078
Actinomycetota
GGG
Pro
>WENV183567105
OOCB01000172
176078
Actinomycetota
GGG
Pro
>WENV183567204
OOCB01000263
20208
Actinomycetota
GAG
Leu
>WENV183566908
OOCB01000054
59689
Actinomycetota
GGA
Ser
>WENV183567605
OOCB01000711
59689
Actinomycetota
GGA
Ser
>WENV183566849
OOCB01000034
175837
Actinomycetota
ACG
Arg
>WENV183567123
OOCB01000187
175837
Actinomycetota
ACG
Arg
>WENV183567301
OOCB01000354
175837
Actinomycetota
ACG
Arg
>WENV183568673
OOCB01005391
29393
Actinomycetota
GCT
Ser
>WENV183566970
OOCB01000087
280549
Actinomycetota
CAC
Val
>WENV183567574
OOCB01000651
380862
Actinomycetota
CAC
Val
>WENV183568210
OOCB01002338
380862
Actinomycetota
CAC
Val
>WENV183567103
OOCB01000171
24925
Actinomycetota
GCT
Ser
>WENV183566911
OOCB01000054
349164
Actinomycetota
CTC
Glu
>WENV183567606
OOCB01000711
349164
Actinomycetota
CTC
Glu
>WENV183567202
OOCB01000263
398947
Actinomycetota
CCA
Trp
>WENV183568188
OOCB01002251
56383
Actinomycetota
CGA
Ser
>WENV183567829
OOCB01001167
280702
Actinomycetota
GGC
Ala
>WENV183567830
OOCB01001167
280702
Actinomycetota
GGC
Ala
>WENV183568151
OOCB01002116
398843
Actinomycetota
GTT
Asn
>WENV183566932
OOCB01000072
176077
Actinomycetota
CAT
Met
>WENV183567317
OOCB01000378
283312
Actinomycetota
GTG
His
>WENV183567672
OOCB01000791
241064
Actinomycetota
CTC
Glu
>WENV183567807
OOCB01001113
241064
Actinomycetota
CTC
Glu
>WENV183567192
OOCB01000247
176638
Actinomycetota
GGG
Pro
>WENV183567018
OOCB01000125
280524
Actinomycetota
TGC
Ala
>WENV183567054
OOCB01000154
280524
Actinomycetota
TGC
Ala
>WENV183566913
OOCB01000054
283313
Actinomycetota
CCG
Arg
>WENV183566927
OOCB01000072
398948
Actinomycetota
TTC
Glu
>WENV183568409
OOCB01003228
398948
Actinomycetota
TTC
Glu
>WENV183568942
OOCB01009898
398948
Actinomycetota
TTC
Glu
>WENV183567214
OOCB01000278
291585
Actinomycetota
GCC
Gly
>WENV183568995
OOCB01011192
291585
Actinomycetota
GCC
Gly
>WENV183567939
OOCB01001456
150272
Actinomycetota
TAA
Leu
>WENV183567101
OOCB01000171
117777
Actinomycetota
>WENV183567055
OOCB01000154
280523
Actinomycetota
GGC
Ala
>WENV183567383
OOCB01000441
280523
Actinomycetota
GGC
Ala
>WENV183567412
OOCB01000472
280523
Actinomycetota
GGC
Ala
>WENV183567575
OOCB01000651
280523
Actinomycetota
GGC
Ala
>WENV183568695
OOCB01005654
175949
Actinomycetota
CAT
Met
>WENV183567012
OOCB01000120
227544
Actinomycetota
TAC
Val
>WENV183567473
OOCB01000528
176555
Actinomycetota
CAT
Met
>WENV183568190
OOCB01002263
191955
Actinomycetota
TGT
Thr
>WENV183566902
OOCB01000052
20415
Actinomycetota
GAG
Leu
>WENV183567741
OOCB01000924
280544
Actinomycetota
GTG
His
>WENV183566879
OOCB01000044
280536
Actinomycetota
CTT
Lys
>WENV183566880
OOCB01000044
280536
Actinomycetota
CTT
Lys
>WENV183566964
OOCB01000087
280496
Actinomycetota
CGT
Thr
>WENV183566933
OOCB01000072
280703
Actinomycetota
CCT
Arg
>WENV183567572
OOCB01000651
140879
Actinomycetota
TAG
Leu
>WENV183567831
OOCB01001167
184157
Actinomycetota
TGG
Pro
>WENV183568046
OOCB01001778
175926
Actinomycetota
CAT
Met
>WENV183567839
OOCB01001187
178569
Actinomycetota
CAT
Met
>WENV183567033
OOCB01000136
280450
Actinomycetota
TTT
Lys
>WENV183566969
OOCB01000087
468141
Actinomycetota
GAC
Val
>WENV183566962
OOCB01000087
323758
Actinomycetota
CGT
Thr
>WENV183567482
OOCB01000531
56166
Actinomycetota
TGA
Ser
>WENV183566967
OOCB01000087
358727
Actinomycetota
CCG
Arg
>WENV183567761
OOCB01000975
358727
Actinomycetota
CCG
Arg
>WENV183566910
OOCB01000054
480329
Actinomycetota
CCC
Gly
>WENV183567057
OOCB01000154
480329
Actinomycetota
CCC
Gly
>WENV183567806
OOCB01001113
483206
Actinomycetota
CTG
Gln
>WENV183568973
OOCB01010711
175882
Actinomycetota
TGG
Pro
>WENV183566909
OOCB01000054
99865
Actinomycetota
CAG
Leu
>WENV183567989
OOCB01001600
99865
Actinomycetota
CAG
Leu
>WENV183566966
OOCB01000087
222475
Actinomycetota
CTT
Lys
>WENV183567283
OOCB01000335
222475
Actinomycetota
CTT
Lys
>WENV183567555
OOCB01000624
480319
Actinomycetota
TTG
Gln
>WENV183567221
OOCB01000295
280489
Actinomycetota
CTC
Glu
>WENV183568447
OOCB01003416
280499
Actinomycetota
CCT
Arg
>WENV183566912
OOCB01000054
398853
Actinomycetota
CTG
Gln
>WENV183567222
OOCB01000295
398853
Actinomycetota
CTG
Gln
>WENV183567607
OOCB01000711
398853
Actinomycetota
CTG
Gln
>WENV183567784
OOCB01001031
176642
Actinomycetota
CAA
Leu
>WENV183566860
OOCB01000037
175843
Actinomycetota
CAA
Leu
>WENV183568411
OOCB01003243
175843
Actinomycetota
CAA
Leu
>WENV183567225
OOCB01000301
237585
Actinomycetota
TAC
Val
>WENV183566848
OOCB01000034
203883
Actinomycetota
TCT
Arg
>WENV183566929
OOCB01000072
56075
Actinomycetota
TGA
Ser
>WENV183567481
OOCB01000531
46642
Actinomycetota
CGA
Ser
>WENV183567052
OOCB01000154
104211
Actinomycetota
CAG
Leu
>WENV183567124
OOCB01000187
178568
Actinomycetota
ACG
Arg
>WENV183567037
OOCB01000140
117903
Actinomycetota
GTA
Tyr
>WENV183567017
OOCB01000125
179238
Actinomycetota
GAT
Ile
>WENV183567802
OOCB01001105
506175
Actinomycetota
TTG
Gln
>WENV183567828
OOCB01001167
506175
Actinomycetota
TTG
Gln
>WENV183567571
OOCB01000651
280470
Actinomycetota
CGT
Thr
>WENV183568258
OOCB01002574
280470
Actinomycetota
CGT
Thr
>WENV183567223
OOCB01000295
280470
Actinomycetota
CGT
Thr
>WENV183567988
OOCB01001600
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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