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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183570663
OOCD01004721
175883
Actinomycetota
GAT
Ile
>WENV183570472
OOCD01001609
175907
Actinomycetota
TAC
Val
>WENV183570395
OOCD01001016
349003
Actinomycetota
CCG
Arg
>WENV183570393
OOCD01000971
147806
Actinomycetota
TAA
Leu
>WENV183570791
OOCD01010899
280498
Actinomycetota
GTT
Asn
>WENV183570266
OOCD01000310
280503
Actinomycetota
CCT
Arg
>WENV183570497
OOCD01001793
140768
Actinomycetota
TAG
Leu
>WENV183570530
OOCD01002230
176075
Actinomycetota
TCT
Arg
>WENV183570405
OOCD01001080
482604
Actinomycetota
TTG
Gln
>WENV183570763
OOCD01008816
152047
Actinomycetota
ACG
Arg
>WENV183570777
OOCD01009643
59689
Actinomycetota
GGA
Ser
>WENV183570705
OOCD01006242
175837
Actinomycetota
ACG
Arg
>WENV183570375
OOCD01000800
29393
Actinomycetota
GCT
Ser
>WENV183570599
OOCD01003506
280549
Actinomycetota
CAC
Val
>WENV183570406
OOCD01001080
280702
Actinomycetota
GGC
Ala
>WENV183570508
OOCD01001988
176077
Actinomycetota
CAT
Met
>WENV183570622
OOCD01003904
21508
Actinomycetota
GAG
Leu
>WENV183570297
OOCD01000413
241064
Actinomycetota
CTC
Glu
>WENV183570522
OOCD01002094
280524
Actinomycetota
TGC
Ala
>WENV183570456
OOCD01001483
398948
Actinomycetota
TTC
Glu
>WENV183570565
OOCD01002794
176723
Actinomycetota
TCT
Arg
>WENV183570766
OOCD01008816
480374
Actinomycetota
TTG
Gln
>WENV183570659
OOCD01004638
291585
Actinomycetota
GCC
Gly
>WENV183570342
OOCD01000628
150272
Actinomycetota
TAA
Leu
>WENV183570540
OOCD01002390
117777
Actinomycetota
>WENV183570564
OOCD01002787
280523
Actinomycetota
GGC
Ala
>WENV183571114
OOCD01062211
175949
Actinomycetota
CAT
Met
>WENV183570842
OOCD01014523
176555
Actinomycetota
CAT
Met
>WENV183570328
OOCD01000549
191955
Actinomycetota
TGT
Thr
>WENV183570792
OOCD01011165
280544
Actinomycetota
GTG
His
>WENV183570718
OOCD01006755
280536
Actinomycetota
CTT
Lys
>WENV183570719
OOCD01006755
280536
Actinomycetota
CTT
Lys
>WENV183570498
OOCD01001793
280496
Actinomycetota
CGT
Thr
>WENV183570606
OOCD01003632
280703
Actinomycetota
CCT
Arg
>WENV183570285
OOCD01000373
175926
Actinomycetota
CAT
Met
>WENV183570108
OOCD01000056
280450
Actinomycetota
TTT
Lys
>WENV183570496
OOCD01001793
323758
Actinomycetota
CGT
Thr
>WENV183570167
OOCD01000143
480329
Actinomycetota
CCC
Gly
>WENV183570296
OOCD01000413
483206
Actinomycetota
CTG
Gln
>WENV183570721
OOCD01006799
175882
Actinomycetota
TGG
Pro
>WENV183570701
OOCD01006129
222475
Actinomycetota
CTT
Lys
>WENV183570646
OOCD01004426
280499
Actinomycetota
CCT
Arg
>WENV183570582
OOCD01003031
398853
Actinomycetota
CTG
Gln
>WENV183570714
OOCD01006580
176642
Actinomycetota
CAA
Leu
>WENV183570864
OOCD01016241
175843
Actinomycetota
CAA
Leu
>WENV183570320
OOCD01000504
237585
Actinomycetota
TAC
Val
>WENV183570430
OOCD01001287
46642
Actinomycetota
CGA
Ser
>WENV183570168
OOCD01000143
104211
Actinomycetota
CAG
Leu
>WENV183570431
OOCD01001299
117903
Actinomycetota
GTA
Tyr
>WENV183570521
OOCD01002094
179238
Actinomycetota
GAT
Ile
>WENV183570698
OOCD01006045
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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