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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183571477
OOCE01004258
176499
Actinomycetota
CAT
Met
>WENV183571426
OOCE01002274
175883
Actinomycetota
GAT
Ile
>WENV183571398
OOCE01001851
147806
Actinomycetota
TAA
Leu
>WENV183571257
OOCE01000315
280503
Actinomycetota
CCT
Arg
>WENV183571396
OOCE01001831
140768
Actinomycetota
TAG
Leu
>WENV183571679
OOCE01031283
59689
Actinomycetota
GGA
Ser
>WENV183571452
OOCE01003136
175837
Actinomycetota
ACG
Arg
>WENV183571726
OOCE01039860
241064
Actinomycetota
CTC
Glu
>WENV183571616
OOCE01019179
280524
Actinomycetota
TGC
Ala
>WENV183571382
OOCE01001636
176723
Actinomycetota
TCT
Arg
>WENV183571617
OOCE01019179
280523
Actinomycetota
GGC
Ala
>WENV183571671
OOCE01027957
280536
Actinomycetota
CTT
Lys
>WENV183571274
OOCE01000429
358727
Actinomycetota
CCG
Arg
>WENV183571725
OOCE01039860
483206
Actinomycetota
CTG
Gln
>WENV183571741
OOCE01042842
175882
Actinomycetota
TGG
Pro
>WENV183571449
OOCE01003100
280489
Actinomycetota
CTC
Glu
>WENV183571450
OOCE01003100
398853
Actinomycetota
CTG
Gln
>WENV183571236
OOCE01000194
46642
Actinomycetota
CGA
Ser
>WENV183571614
OOCE01019145
104211
Actinomycetota
CAG
Leu
>WENV183571476
OOCE01004258
117903
Actinomycetota
GTA
Tyr
>WENV183571395
OOCE01001831
280470
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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