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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183572214
OOCF01001759
179231
Actinomycetota
TAC
Val
>WENV183572244
OOCF01002425
176499
Actinomycetota
CAT
Met
>WENV183572614
OOCF01039679
175883
Actinomycetota
GAT
Ile
>WENV183572340
OOCF01004857
280498
Actinomycetota
GTT
Asn
>WENV183572393
OOCF01006689
280503
Actinomycetota
CCT
Arg
>WENV183572111
OOCF01000851
459899
Actinomycetota
TTC
Glu
>WENV183572179
OOCF01001437
140768
Actinomycetota
TAG
Leu
>WENV183572240
OOCF01002270
59689
Actinomycetota
GGA
Ser
>WENV183572126
OOCF01001018
175837
Actinomycetota
ACG
Arg
>WENV183572127
OOCF01001018
175837
Actinomycetota
ACG
Arg
>WENV183572445
OOCF01008827
187349
Actinomycetota
TGG
Pro
>WENV183572204
OOCF01001649
280441
Actinomycetota
CCG
Arg
>WENV183572554
OOCF01023273
176077
Actinomycetota
CAT
Met
>WENV183572374
OOCF01006222
241064
Actinomycetota
CTC
Glu
>WENV183572344
OOCF01005110
176638
Actinomycetota
GGG
Pro
>WENV183572192
OOCF01001515
280523
Actinomycetota
GGC
Ala
>WENV183572112
OOCF01000851
175872
Actinomycetota
GTC
Asp
>WENV183572061
OOCF01000581
20205
Actinomycetota
GCT
Ser
>WENV183572152
OOCF01001250
280450
Actinomycetota
TTT
Lys
>WENV183572573
OOCF01028317
468141
Actinomycetota
GAC
Val
>WENV183572456
OOCF01009738
480329
Actinomycetota
CCC
Gly
>WENV183572373
OOCF01006222
483206
Actinomycetota
CTG
Gln
>WENV183572007
OOCF01000379
280489
Actinomycetota
CTC
Glu
>WENV183572229
OOCF01002169
280499
Actinomycetota
CCT
Arg
>WENV183572008
OOCF01000379
398853
Actinomycetota
CTG
Gln
>WENV183572478
OOCF01011499
175843
Actinomycetota
CAA
Leu
>WENV183572437
OOCF01008372
203883
Actinomycetota
TCT
Arg
>WENV183572058
OOCF01000574
56075
Actinomycetota
TGA
Ser
>WENV183572022
OOCF01000436
46642
Actinomycetota
CGA
Ser
>WENV183572083
OOCF01000680
104211
Actinomycetota
CAG
Leu
>WENV183572243
OOCF01002425
117903
Actinomycetota
GTA
Tyr
>WENV183572357
OOCF01005483
56071
Actinomycetota
TGA
Ser
>WENV183572481
OOCF01011954
147796
Actinomycetota
TAA
Leu
>WENV183572412
OOCF01007403
506175
Actinomycetota
TTG
Gln
>WENV183572178
OOCF01001437
280470
Actinomycetota
CGT
Thr
>WENV183572523
OOCF01017047
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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