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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
64 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183581043
OOCN01001795
481233
Actinomycetota
CCC
Gly
>WENV183580832
OOCN01000608
176499
Actinomycetota
CAT
Met
>WENV183581131
OOCN01003061
175883
Actinomycetota
GAT
Ile
>WENV183580946
OOCN01001144
175907
Actinomycetota
TAC
Val
>WENV183580863
OOCN01000750
283311
Actinomycetota
CCT
Arg
>WENV183580976
OOCN01001328
316729
Actinomycetota
CAC
Val
>WENV183580861
OOCN01000744
280503
Actinomycetota
CCT
Arg
>WENV183580682
OOCN01000242
295964
Actinomycetota
GTT
Asn
>WENV183581128
OOCN01003016
56083
Actinomycetota
CGA
Ser
>WENV183580805
OOCN01000538
140768
Actinomycetota
TAG
Leu
>WENV183580968
OOCN01001295
56384
Actinomycetota
TGA
Ser
>WENV183580938
OOCN01001113
176075
Actinomycetota
TCT
Arg
>WENV183581260
OOCN01009559
176078
Actinomycetota
GGG
Pro
>WENV183580825
OOCN01000575
59689
Actinomycetota
GGA
Ser
>WENV183581282
OOCN01011082
175837
Actinomycetota
ACG
Arg
>WENV183581209
OOCN01005730
46681
Actinomycetota
CGA
Ser
>WENV183581022
OOCN01001651
29393
Actinomycetota
GCT
Ser
>WENV183581010
OOCN01001469
280549
Actinomycetota
CAC
Val
>WENV183580681
OOCN01000241
187349
Actinomycetota
TGG
Pro
>WENV183581046
OOCN01001824
24925
Actinomycetota
GCT
Ser
>WENV183581069
OOCN01001940
349164
Actinomycetota
CTC
Glu
>WENV183580957
OOCN01001218
56383
Actinomycetota
CGA
Ser
>WENV183581320
OOCN01017729
280702
Actinomycetota
GGC
Ala
>WENV183580503
OOCN01000059
140878
Actinomycetota
TAA
Leu
>WENV183580888
OOCN01000826
398843
Actinomycetota
GTT
Asn
>WENV183581019
OOCN01001615
176077
Actinomycetota
CAT
Met
>WENV183580920
OOCN01000993
283312
Actinomycetota
GTG
His
>WENV183581219
OOCN01006046
21508
Actinomycetota
GAG
Leu
>WENV183580979
OOCN01001330
241064
Actinomycetota
CTC
Glu
>WENV183580987
OOCN01001363
241064
Actinomycetota
CTC
Glu
>WENV183580742
OOCN01000360
280524
Actinomycetota
TGC
Ala
>WENV183580837
OOCN01000626
283313
Actinomycetota
CCG
Arg
>WENV183581294
OOCN01013333
398948
Actinomycetota
TTC
Glu
>WENV183581140
OOCN01003269
291585
Actinomycetota
GCC
Gly
>WENV183581059
OOCN01001899
150272
Actinomycetota
TAA
Leu
>WENV183581089
OOCN01002398
117777
Actinomycetota
>WENV183580831
OOCN01000608
117777
Actinomycetota
>WENV183580800
OOCN01000531
280523
Actinomycetota
GGC
Ala
>WENV183580977
OOCN01001328
280523
Actinomycetota
GGC
Ala
>WENV183581090
OOCN01002398
175949
Actinomycetota
CAT
Met
>WENV183580598
OOCN01000141
227544
Actinomycetota
TAC
Val
>WENV183580838
OOCN01000633
191955
Actinomycetota
TGT
Thr
>WENV183580857
OOCN01000727
20415
Actinomycetota
GAG
Leu
>WENV183581091
OOCN01002403
280544
Actinomycetota
GTG
His
>WENV183581319
OOCN01017088
179229
Actinomycetota
GTC
Asp
>WENV183580814
OOCN01000549
280536
Actinomycetota
CTT
Lys
>WENV183580806
OOCN01000538
280496
Actinomycetota
CGT
Thr
>WENV183580911
OOCN01000923
280703
Actinomycetota
CCT
Arg
>WENV183580811
OOCN01000547
140879
Actinomycetota
TAG
Leu
>WENV183580855
OOCN01000723
175926
Actinomycetota
CAT
Met
>WENV183580630
OOCN01000169
178569
Actinomycetota
CAT
Met
>WENV183581202
OOCN01005430
178569
Actinomycetota
CAT
Met
>WENV183580804
OOCN01000538
323758
Actinomycetota
CGT
Thr
>WENV183581157
OOCN01003815
358727
Actinomycetota
CCG
Arg
>WENV183580893
OOCN01000850
480329
Actinomycetota
CCC
Gly
>WENV183580978
OOCN01001330
483206
Actinomycetota
CTG
Gln
>WENV183580892
OOCN01000850
99865
Actinomycetota
CAG
Leu
>WENV183580759
OOCN01000392
222475
Actinomycetota
CTT
Lys
>WENV183581249
OOCN01008405
480319
Actinomycetota
TTG
Gln
>WENV183581070
OOCN01001940
398853
Actinomycetota
CTG
Gln
>WENV183580680
OOCN01000241
175843
Actinomycetota
CAA
Leu
>WENV183581098
OOCN01002500
56075
Actinomycetota
TGA
Ser
>WENV183580801
OOCN01000531
506175
Actinomycetota
TTG
Gln
>WENV183580810
OOCN01000547
280470
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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