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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183587932
OOCU01006971
175883
Actinomycetota
GAT
Ile
>WENV183587642
OOCU01000609
175907
Actinomycetota
TAC
Val
>WENV183587339
OOCU01000064
349003
Actinomycetota
CCG
Arg
>WENV183587415
OOCU01000146
280498
Actinomycetota
GTT
Asn
>WENV183587417
OOCU01000146
280498
Actinomycetota
GTT
Asn
>WENV183587416
OOCU01000146
295964
Actinomycetota
GTT
Asn
>WENV183587389
OOCU01000107
56083
Actinomycetota
CGA
Ser
>WENV183587335
OOCU01000064
140768
Actinomycetota
TAG
Leu
>WENV183587479
OOCU01000233
176075
Actinomycetota
TCT
Arg
>WENV183587544
OOCU01000330
175848
Actinomycetota
TGG
Pro
>WENV183587437
OOCU01000179
176078
Actinomycetota
GGG
Pro
>WENV183587401
OOCU01000128
20208
Actinomycetota
GAG
Leu
>WENV183587541
OOCU01000330
482604
Actinomycetota
TTG
Gln
>WENV183587353
OOCU01000076
59689
Actinomycetota
GGA
Ser
>WENV183587474
OOCU01000229
175837
Actinomycetota
ACG
Arg
>WENV183587475
OOCU01000229
175837
Actinomycetota
ACG
Arg
>WENV183587388
OOCU01000107
29393
Actinomycetota
GCT
Ser
>WENV183587342
OOCU01000064
280549
Actinomycetota
CAC
Val
>WENV183587435
OOCU01000179
280549
Actinomycetota
CAC
Val
>WENV183587350
OOCU01000076
349164
Actinomycetota
CTC
Glu
>WENV183587407
OOCU01000131
398947
Actinomycetota
CCA
Trp
>WENV183587542
OOCU01000330
280702
Actinomycetota
GGC
Ala
>WENV183587543
OOCU01000330
280702
Actinomycetota
GGC
Ala
>WENV183587817
OOCU01002377
398843
Actinomycetota
GTT
Asn
>WENV183587341
OOCU01000064
434162
Actinomycetota
GAC
Val
>WENV183587434
OOCU01000179
434162
Actinomycetota
GAC
Val
>WENV183587320
OOCU01000049
176077
Actinomycetota
CAT
Met
>WENV183587330
OOCU01000059
280524
Actinomycetota
TGC
Ala
>WENV183587934
OOCU01007131
481719
Actinomycetota
GCA
Cys
>WENV183587315
OOCU01000049
398948
Actinomycetota
TTC
Glu
>WENV183588016
OOCU01018897
176723
Actinomycetota
TCT
Arg
>WENV183587933
OOCU01007131
291585
Actinomycetota
GCC
Gly
>WENV183587536
OOCU01000323
150272
Actinomycetota
TAA
Leu
>WENV183587386
OOCU01000107
117777
Actinomycetota
>WENV183587387
OOCU01000107
175949
Actinomycetota
CAT
Met
>WENV183587328
OOCU01000059
191955
Actinomycetota
TGT
Thr
>WENV183587478
OOCU01000233
280544
Actinomycetota
GTG
His
>WENV183587828
OOCU01002599
280536
Actinomycetota
CTT
Lys
>WENV183587829
OOCU01002599
280536
Actinomycetota
CTT
Lys
>WENV183587336
OOCU01000064
280496
Actinomycetota
CGT
Thr
>WENV183587321
OOCU01000049
280703
Actinomycetota
CCT
Arg
>WENV183587786
OOCU01001770
175926
Actinomycetota
CAT
Met
>WENV183587832
OOCU01002758
280450
Actinomycetota
TTT
Lys
>WENV183587334
OOCU01000064
323758
Actinomycetota
CGT
Thr
>WENV183587877
OOCU01004199
480329
Actinomycetota
CCC
Gly
>WENV183587338
OOCU01000064
222475
Actinomycetota
CTT
Lys
>WENV183587351
OOCU01000076
398853
Actinomycetota
CTG
Gln
>WENV183587537
OOCU01000323
175843
Actinomycetota
CAA
Leu
>WENV183587406
OOCU01000131
3983
Actinomycetota
GCT
Ser
>WENV183587317
OOCU01000049
56075
Actinomycetota
TGA
Ser
>WENV183587923
OOCU01005886
46642
Actinomycetota
CGA
Ser
>WENV183588018
OOCU01019101
117903
Actinomycetota
GTA
Tyr
>WENV183587329
OOCU01000059
179238
Actinomycetota
GAT
Ile
>WENV183587701
OOCU01000859
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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