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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183589036
OOCW01000007
176499
Actinomycetota
CAT
Met
>WENV183589178
OOCW01000105
147806
Actinomycetota
TAA
Leu
>WENV183589320
OOCW01000410
280498
Actinomycetota
GTT
Asn
>WENV183589696
OOCW01003113
56083
Actinomycetota
CGA
Ser
>WENV183589032
OOCW01000007
140768
Actinomycetota
TAG
Leu
>WENV183589884
OOCW01011245
176075
Actinomycetota
TCT
Arg
>WENV183589945
OOCW01018977
29393
Actinomycetota
GCT
Ser
>WENV183589788
OOCW01006358
280702
Actinomycetota
GGC
Ala
>WENV183589789
OOCW01006358
280702
Actinomycetota
GGC
Ala
>WENV183589892
OOCW01012311
176077
Actinomycetota
CAT
Met
>WENV183589872
OOCW01010283
21508
Actinomycetota
GAG
Leu
>WENV183589029
OOCW01000006
176638
Actinomycetota
GGG
Pro
>WENV183589216
OOCW01000179
280524
Actinomycetota
TGC
Ala
>WENV183589362
OOCW01000578
176723
Actinomycetota
TCT
Arg
>WENV183589791
OOCW01006455
150272
Actinomycetota
TAA
Leu
>WENV183589875
OOCW01010517
117777
Actinomycetota
>WENV183589319
OOCW01000410
280523
Actinomycetota
GGC
Ala
>WENV183589270
OOCW01000281
176555
Actinomycetota
CAT
Met
>WENV183589757
OOCW01004950
191955
Actinomycetota
TGT
Thr
>WENV183589862
OOCW01009766
280496
Actinomycetota
CGT
Thr
>WENV183590030
OOCW01044449
323758
Actinomycetota
CGT
Thr
>WENV183589037
OOCW01000007
56166
Actinomycetota
TGA
Ser
>WENV183589714
OOCW01003511
358727
Actinomycetota
CCG
Arg
>WENV183589217
OOCW01000179
480329
Actinomycetota
CCC
Gly
>WENV183589180
OOCW01000105
175882
Actinomycetota
TGG
Pro
>WENV183589030
OOCW01000006
480319
Actinomycetota
TTG
Gln
>WENV183589190
OOCW01000128
280489
Actinomycetota
CTC
Glu
>WENV183589328
OOCW01000445
280499
Actinomycetota
CCT
Arg
>WENV183589191
OOCW01000128
398853
Actinomycetota
CTG
Gln
>WENV183589179
OOCW01000105
176642
Actinomycetota
CAA
Leu
>WENV183589902
OOCW01013566
175843
Actinomycetota
CAA
Leu
>WENV183589051
OOCW01000012
237585
Actinomycetota
TAC
Val
>WENV183589042
OOCW01000007
46642
Actinomycetota
CGA
Ser
>WENV183589214
OOCW01000179
104211
Actinomycetota
CAG
Leu
>WENV183589035
OOCW01000007
117903
Actinomycetota
GTA
Tyr
>WENV183589031
OOCW01000007
280470
Actinomycetota
CGT
Thr
>WENV183589812
OOCW01007297
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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