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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183593323
OODB01000001
179231
Actinomycetota
TAC
Val
>WENV183593341
OODB01000003
176499
Actinomycetota
CAT
Met
>WENV183593330
OODB01000002
147806
Actinomycetota
TAA
Leu
>WENV183593371
OODB01000023
280498
Actinomycetota
GTT
Asn
>WENV183593373
OODB01000023
280498
Actinomycetota
GTT
Asn
>WENV183593333
OODB01000002
295964
Actinomycetota
GTT
Asn
>WENV183593337
OODB01000003
140768
Actinomycetota
TAG
Leu
>WENV183593328
OODB01000002
175837
Actinomycetota
ACG
Arg
>WENV183593329
OODB01000002
175837
Actinomycetota
ACG
Arg
>WENV183593403
OODB01000038
280441
Actinomycetota
CCG
Arg
>WENV183594521
OODB01050264
398843
Actinomycetota
GTT
Asn
>WENV183593322
OODB01000001
176638
Actinomycetota
GGG
Pro
>WENV183594566
OODB01062358
484283
Actinomycetota
CTG
Gln
>WENV183593361
OODB01000016
280524
Actinomycetota
TGC
Ala
>WENV183593370
OODB01000023
176723
Actinomycetota
TCT
Arg
>WENV183593362
OODB01000016
280523
Actinomycetota
GGC
Ala
>WENV183593372
OODB01000023
280523
Actinomycetota
GGC
Ala
>WENV183593387
OODB01000029
176555
Actinomycetota
CAT
Met
>WENV183593786
OODB01000817
280450
Actinomycetota
TTT
Lys
>WENV183593342
OODB01000003
56166
Actinomycetota
TGA
Ser
>WENV183593358
OODB01000016
480329
Actinomycetota
CCC
Gly
>WENV183593332
OODB01000002
175882
Actinomycetota
TGG
Pro
>WENV183593320
OODB01000001
480319
Actinomycetota
TTG
Gln
>WENV183593334
OODB01000003
280489
Actinomycetota
CTC
Glu
>WENV183593324
OODB01000001
280499
Actinomycetota
CCT
Arg
>WENV183593335
OODB01000003
398853
Actinomycetota
CTG
Gln
>WENV183593331
OODB01000002
176642
Actinomycetota
CAA
Leu
>WENV183593343
OODB01000003
46642
Actinomycetota
CGA
Ser
>WENV183593359
OODB01000016
104211
Actinomycetota
CAG
Leu
>WENV183593340
OODB01000003
117903
Actinomycetota
GTA
Tyr
>WENV183593336
OODB01000003
280470
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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