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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183604892
OODM01000066
176499
Actinomycetota
CAT
Met
>WENV183605478
OODM01003949
175907
Actinomycetota
TAC
Val
>WENV183604952
OODM01000115
349003
Actinomycetota
CCG
Arg
>WENV183604924
OODM01000101
147806
Actinomycetota
TAA
Leu
>WENV183604814
OODM01000014
280498
Actinomycetota
GTT
Asn
>WENV183604815
OODM01000014
280498
Actinomycetota
GTT
Asn
>WENV183604817
OODM01000014
280498
Actinomycetota
GTT
Asn
>WENV183605383
OODM01002003
56083
Actinomycetota
CGA
Ser
>WENV183604935
OODM01000106
140768
Actinomycetota
TAG
Leu
>WENV183605381
OODM01001975
176075
Actinomycetota
TCT
Arg
>WENV183605612
OODM01013408
175848
Actinomycetota
TGG
Pro
>WENV183604991
OODM01000154
482604
Actinomycetota
TTG
Gln
>WENV183605254
OODM01000845
152047
Actinomycetota
ACG
Arg
>WENV183605473
OODM01003761
175837
Actinomycetota
ACG
Arg
>WENV183605348
OODM01001562
280549
Actinomycetota
CAC
Val
>WENV183604992
OODM01000154
280702
Actinomycetota
GGC
Ala
>WENV183605347
OODM01001562
434162
Actinomycetota
GAC
Val
>WENV183605458
OODM01003461
176077
Actinomycetota
CAT
Met
>WENV183605147
OODM01000453
176638
Actinomycetota
GGG
Pro
>WENV183605296
OODM01001042
280524
Actinomycetota
TGC
Ala
>WENV183605593
OODM01010442
481719
Actinomycetota
GCA
Cys
>WENV183605595
OODM01010442
481719
Actinomycetota
GCA
Cys
>WENV183605106
OODM01000332
176723
Actinomycetota
TCT
Arg
>WENV183605592
OODM01010442
291585
Actinomycetota
GCC
Gly
>WENV183605594
OODM01010442
291585
Actinomycetota
GCC
Gly
>WENV183605513
OODM01005030
150272
Actinomycetota
TAA
Leu
>WENV183604816
OODM01000014
280523
Actinomycetota
GGC
Ala
>WENV183605008
OODM01000171
176555
Actinomycetota
CAT
Met
>WENV183604936
OODM01000106
280496
Actinomycetota
CGT
Thr
>WENV183605675
OODM01028107
175926
Actinomycetota
CAT
Met
>WENV183604812
OODM01000010
280450
Actinomycetota
TTT
Lys
>WENV183605001
OODM01000165
56166
Actinomycetota
TGA
Ser
>WENV183604811
OODM01000010
480329
Actinomycetota
CCC
Gly
>WENV183605330
OODM01001426
483206
Actinomycetota
CTG
Gln
>WENV183605178
OODM01000522
175882
Actinomycetota
TGG
Pro
>WENV183605369
OODM01001957
222475
Actinomycetota
CTT
Lys
>WENV183605143
OODM01000450
280489
Actinomycetota
CTC
Glu
>WENV183604804
OODM01000005
280499
Actinomycetota
CCT
Arg
>WENV183605144
OODM01000450
398853
Actinomycetota
CTG
Gln
>WENV183605177
OODM01000522
176642
Actinomycetota
CAA
Leu
>WENV183605335
OODM01001487
175843
Actinomycetota
CAA
Leu
>WENV183604803
OODM01000005
237585
Actinomycetota
TAC
Val
>WENV183605363
OODM01001879
56075
Actinomycetota
TGA
Ser
>WENV183605360
OODM01001827
46642
Actinomycetota
CGA
Ser
>WENV183604813
OODM01000010
104211
Actinomycetota
CAG
Leu
>WENV183604891
OODM01000066
117903
Actinomycetota
GTA
Tyr
>WENV183605295
OODM01001042
179238
Actinomycetota
GAT
Ile
>WENV183604934
OODM01000106
280470
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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