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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183609980
OODR01016433
175907
Actinomycetota
TAC
Val
>WENV183609961
OODR01014383
295964
Actinomycetota
GTT
Asn
>WENV183609973
OODR01016122
140768
Actinomycetota
TAG
Leu
>WENV183610012
OODR01025735
482604
Actinomycetota
TTG
Gln
>WENV183609828
OODR01004190
59689
Actinomycetota
GGA
Ser
>WENV183609950
OODR01013283
280549
Actinomycetota
CAC
Val
>WENV183609963
OODR01014947
176077
Actinomycetota
CAT
Met
>WENV183610014
OODR01026667
398948
Actinomycetota
TTC
Glu
>WENV183609949
OODR01013283
418252
Actinomycetota
GAC
Val
>WENV183610017
OODR01027111
280544
Actinomycetota
GTG
His
>WENV183609915
OODR01009661
280496
Actinomycetota
CGT
Thr
>WENV183609904
OODR01008684
280450
Actinomycetota
TTT
Lys
>WENV183609972
OODR01016122
323758
Actinomycetota
CGT
Thr
>WENV183609783
OODR01002956
99865
Actinomycetota
CAG
Leu
>WENV183609894
OODR01007896
222475
Actinomycetota
CTT
Lys
>WENV183610029
OODR01029602
398853
Actinomycetota
CTG
Gln
>WENV183609945
OODR01012775
175843
Actinomycetota
CAA
Leu
>WENV183609996
OODR01020249
56075
Actinomycetota
TGA
Ser
>WENV183609903
OODR01008554
317680
Actinomycetota
CCG
Arg
>WENV183610028
OODR01029602
289788
Actinomycetota
CTC
Glu
>WENV183609923
OODR01010664
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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