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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1014174
SRR023845.26717
283096
Actinomycetota
TGC
Ala
>SRA1014223
SRR023845.44619
177965
Actinomycetota
GTC
Asp
>SRA1014281
SRR023845.69644
400294
Actinomycetota
CCG
Arg
>SRA1014348
SRR023845.98686
177965
Actinomycetota
GTC
Asp
>SRA1014378
SRR023845.113966
118177
Actinomycetota
TAG
Leu
>SRA1014394
SRR023845.118773
490635
Actinomycetota
TCC
Gly
>SRA1014497
SRR023845.165528
283096
Actinomycetota
TGC
Ala
>SRA1014541
SRR023845.190617
400294
Actinomycetota
CCG
Arg
>SRA1014651
SRR023845.241331
281033
Actinomycetota
CTC
Glu
>SRA1014667
SRR023845.251124
298510
Actinomycetota
TTT
Lys
>SRA1014714
SRR023845.276697
328473
Actinomycetota
CGT
Thr
>SRA1014721
SRR023845.282491
307128
Actinomycetota
CCA
Trp
>SRA1014746
SRR023845.297246
480474
Actinomycetota
CCC
Gly
>SRA1014765
SRR023845.304271
281661
Actinomycetota
TAC
Val
>SRA1014770
SRR023845.307508
177965
Actinomycetota
GTC
Asp
>SRA1014781
SRR023845.312946
286927
Actinomycetota
TCT
Arg
>SRA1014817
SRR023845.325948
184518
Actinomycetota
CAT
Met
>SRA1014847
SRR023845.341449
400294
Actinomycetota
CCG
Arg
>SRA1014863
SRR023845.348721
283096
Actinomycetota
TGC
Ala
>SRA1014898
SRR023845.370036
30580
Actinomycetota
CGA
Ser
>SRA1014909
SRR023845.377137
283404
Actinomycetota
GTT
Asn
>SRA1014955
SRR023845.396022
283096
Actinomycetota
TGC
Ala
>SRA1014987
SRR023845.412025
56309
Actinomycetota
GAG
Leu
>SRA1015000
SRR023845.418172
176401
Actinomycetota
TAA
Leu
>SRA1015021
SRR023845.424782
480992
Actinomycetota
CCC
Gly
>SRA1015022
SRR023845.424983
282827
Actinomycetota
CTT
Lys
>SRA1015118
SRR023845.466372
46760
Actinomycetota
GAG
Leu
>SRA1015187
SRR023845.491907
399484
Actinomycetota
GCC
Gly
>SRA1015195
SRR023845.495916
400062
Actinomycetota
CAC
Val
>SRA1015201
SRR023845.497204
297665
Actinomycetota
ACG
Arg
>SRA1015242
SRR023845.516619
283404
Actinomycetota
GTT
Asn
>SRA1015260
SRR023845.525549
400291
Actinomycetota
CTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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