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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170269232
CERH01076491
398995
Alphaproteobacteria
CAC
Val
>WENV170269037
CERH01028490
178510
Alphaproteobacteria
ACG
Arg
>WENV170269306
CERH01090260
482973
Alphaproteobacteria
TCC
Gly
>WENV170269114
CERH01049519
400848
Alphaproteobacteria
GAC
Val
>WENV170269329
CERH01093550
282745
Alphaproteobacteria
TAC
Val
>WENV170269075
CERH01036488
207217
Alphaproteobacteria
CCG
Arg
>WENV170269168
CERH01062229
73374
Alphaproteobacteria
CAG
Leu
>WENV170269031
CERH01027275
29841
Alphaproteobacteria
GGA
Ser
>WENV170269118
CERH01050139
404592
Alphaproteobacteria
GGT
Thr
>WENV170269033
CERH01028023
140876
Alphaproteobacteria
>WENV170269184
CERH01066611
140876
Alphaproteobacteria
>WENV170269007
CERH01022368
20437
Alphaproteobacteria
GGA
Ser
>WENV170269001
CERH01021023
400518
Alphaproteobacteria
GAA
Phe
>WENV170269185
CERH01066680
197241
Alphaproteobacteria
GGG
Pro
>WENV170269147
CERH01057639
100185
Alphaproteobacteria
GAG
Leu
>WENV170269166
CERH01061016
178731
Alphaproteobacteria
GTC
Asp
>WENV170268998
CERH01020874
400516
Alphaproteobacteria
TTG
Gln
>WENV170269294
CERH01087844
399480
Alphaproteobacteria
GAA
Phe
>WENV170269061
CERH01032633
400384
Alphaproteobacteria
TTC
Glu
>WENV170269035
CERH01028119
78115
Alphaproteobacteria
GAG
Leu
>WENV170268943
CERH01011659
178734
Alphaproteobacteria
TGG
Pro
>WENV170268972
CERH01015904
340918
Alphaproteobacteria
CGT
Thr
>WENV170268965
CERH01014754
121250
Alphaproteobacteria
TAG
Leu
>WENV170268942
CERH01011659
178733
Alphaproteobacteria
CAT
Met
>WENV170269049
CERH01030024
118316
Alphaproteobacteria
CAA
Leu
>WENV170269234
CERH01076948
282872
Alphaproteobacteria
CCA
Trp
>WENV170269284
CERH01084774
29727
Alphaproteobacteria
CGA
Ser
>WENV170269030
CERH01026929
192275
Alphaproteobacteria
GTG
His
>WENV170269034
CERH01028023
482561
Alphaproteobacteria
TCC
Gly
>WENV170268886
CERH01000259
400517
Alphaproteobacteria
GGT
Thr
>WENV170268991
CERH01019805
481098
Alphaproteobacteria
CTG
Gln
>WENV170269069
CERH01034935
118213
Alphaproteobacteria
TAG
Leu
>WENV170269167
CERH01061753
283256
Alphaproteobacteria
CGT
Thr
>WENV170269368
CERH01129550
178728
Alphaproteobacteria
CGG
Pro
>WENV170269009
CERH01022441
453762
Alphaproteobacteria
CAC
Val
>WENV170268980
CERH01017376
178736
Alphaproteobacteria
CCT
Arg
>WENV170268928
CERH01009828
398994
Alphaproteobacteria
GTT
Asn
>WENV170269220
CERH01074661
179721
Alphaproteobacteria
CCG
Arg
>WENV170269138
CERH01054786
282981
Alphaproteobacteria
CCA
Trp
>WENV170269081
CERH01038373
178507
Alphaproteobacteria
GTG
His
>WENV170269312
CERH01091038
353624
Alphaproteobacteria
CCA
Trp
>WENV170269356
CERH01119777
481099
Alphaproteobacteria
TCC
Gly
>WENV170269244
CERH01077651
190609
Alphaproteobacteria
TCT
Arg
>WENV170269148
CERH01057786
398996
Alphaproteobacteria
GCC
Gly
>WENV170268988
CERH01018936
178505
Alphaproteobacteria
CCG
Arg
>WENV170269110
CERH01047052
283257
Alphaproteobacteria
TTT
Lys
>WENV170268995
CERH01020426
305449
Alphaproteobacteria
CGT
Thr
>WENV170268892
CERH01001377
13340
Alphaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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