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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170290076
CERY01091393
140876
Alphaproteobacteria
>WENV170290127
CERY01107139
400518
Alphaproteobacteria
GAA
Phe
>WENV170290102
CERY01102022
178263
Alphaproteobacteria
GTG
His
>WENV170290089
CERY01096403
178731
Alphaproteobacteria
GTC
Asp
>WENV170289982
CERY01040505
400384
Alphaproteobacteria
TTC
Glu
>WENV170289974
CERY01035301
178734
Alphaproteobacteria
TGG
Pro
>WENV170290025
CERY01066072
121250
Alphaproteobacteria
TAG
Leu
>WENV170289973
CERY01035301
178733
Alphaproteobacteria
CAT
Met
>WENV170290037
CERY01074511
29727
Alphaproteobacteria
CGA
Ser
>WENV170290001
CERY01053143
283510
Alphaproteobacteria
TTT
Lys
>WENV170290155
CERY01111690
400517
Alphaproteobacteria
GGT
Thr
>WENV170289961
CERY01026124
281650
Alphaproteobacteria
CCA
Trp
>WENV170290093
CERY01098971
178736
Alphaproteobacteria
CCT
Arg
>WENV170289993
CERY01047832
345907
Alphaproteobacteria
CGT
Thr
>WENV170290062
CERY01087140
282981
Alphaproteobacteria
CCA
Trp
>WENV170289992
CERY01047832
480900
Alphaproteobacteria
GCA
Cys
>WENV170289954
CERY01021034
190609
Alphaproteobacteria
TCT
Arg
>WENV170290006
CERY01055826
13340
Alphaproteobacteria
GCT
Ser
>WENV170290115
CERY01104603
73523
Alphaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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