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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180294421
OBIY01134705
252328
Alphaproteobacteria
TTT
Lys
>WENV180294184
OBIY01030382
381459
Alphaproteobacteria
CAC
Val
>WENV180294129
OBIY01022380
365250
Alphaproteobacteria
GCC
Gly
>WENV180294215
OBIY01039729
351461
Alphaproteobacteria
TTG
Gln
>WENV180293924
OBIY01004763
99726
Alphaproteobacteria
TAG
Leu
>WENV180294661
OBIY01338495
147089
Alphaproteobacteria
ACG
Arg
>WENV180294720
OBIY01407085
113700
Alphaproteobacteria
>WENV180294370
OBIY01103487
162262
Alphaproteobacteria
GAC
Val
>WENV180293880
OBIY01003394
195945
Alphaproteobacteria
GAT
Ile
>WENV180294132
OBIY01022470
239119
Alphaproteobacteria
CGT
Thr
>WENV180294680
OBIY01356569
338282
Alphaproteobacteria
GTT
Asn
>WENV180294710
OBIY01399046
147083
Alphaproteobacteria
GGG
Pro
>WENV180294280
OBIY01060596
307050
Alphaproteobacteria
GGC
Ala
>WENV180293548
OBIY01000075
182651
Alphaproteobacteria
GTC
Asp
>WENV180293848
OBIY01002255
339846
Alphaproteobacteria
GAC
Val
>WENV180294581
OBIY01265433
340288
Alphaproteobacteria
GCC
Gly
>WENV180294353
OBIY01092852
147879
Alphaproteobacteria
TGG
Pro
>WENV180293881
OBIY01003394
251610
Alphaproteobacteria
TGC
Ala
>WENV180294700
OBIY01384792
147334
Alphaproteobacteria
CAT
Met
>WENV180294463
OBIY01167362
157999
Alphaproteobacteria
TCT
Arg
>WENV180294197
OBIY01033942
235496
Alphaproteobacteria
TAC
Val
>WENV180294349
OBIY01087752
23650
Alphaproteobacteria
TGA
Ser
>WENV180294449
OBIY01155211
339750
Alphaproteobacteria
GGT
Thr
>WENV180294176
OBIY01029469
151730
Alphaproteobacteria
CCG
Arg
>WENV180293650
OBIY01000378
258175
Alphaproteobacteria
CGC
Ala
>WENV180294566
OBIY01255026
237281
Alphaproteobacteria
CGT
Thr
>WENV180294471
OBIY01171827
59164
Alphaproteobacteria
GAG
Leu
>WENV180294739
OBIY01440501
242540
Alphaproteobacteria
TGC
Ala
>WENV180294386
OBIY01112573
354623
Alphaproteobacteria
GAC
Val
>WENV180294135
OBIY01023265
338760
Alphaproteobacteria
GAA
Phe
>WENV180293556
OBIY01000093
424918
Alphaproteobacteria
TCC
Gly
>WENV180293938
OBIY01005418
352191
Alphaproteobacteria
GGT
Thr
>WENV180294276
OBIY01058231
147087
Alphaproteobacteria
GTG
His
>WENV180294644
OBIY01323346
150356
Alphaproteobacteria
GTC
Asp
>WENV180293723
OBIY01000753
150356
Alphaproteobacteria
GTC
Asp
>WENV180293717
OBIY01000728
236045
Alphaproteobacteria
CGT
Thr
>WENV180293600
OBIY01000166
259072
Alphaproteobacteria
CGC
Ala
>WENV180294401
OBIY01122130
33688
Alphaproteobacteria
CGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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