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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180363105
OBNY01000222
339722
Alphaproteobacteria
TTG
Gln
>WENV180363122
OBNY01000749
167926
Alphaproteobacteria
CAT
Met
>WENV180363132
OBNY01001387
338760
Alphaproteobacteria
GAA
Phe
>WENV180363147
OBNY01002361
435528
Alphaproteobacteria
GCA
Cys
>WENV180363155
OBNY01002794
161002
Alphaproteobacteria
GTG
His
>WENV180363165
OBNY01003432
113700
Alphaproteobacteria
>WENV180363182
OBNY01004793
148353
Alphaproteobacteria
CAT
Met
>WENV180363183
OBNY01004793
147088
Alphaproteobacteria
CCT
Arg
>WENV180363210
OBNY01007552
148353
Alphaproteobacteria
CAT
Met
>WENV180363216
OBNY01008811
339606
Alphaproteobacteria
>WENV180363261
OBNY01014105
338282
Alphaproteobacteria
GTT
Asn
>WENV180363445
OBNY01057861
23468
Alphaproteobacteria
GCT
Ser
>WENV180363517
OBNY01083699
199776
Alphaproteobacteria
CGG
Pro
>WENV180363530
OBNY01094497
412424
Alphaproteobacteria
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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