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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180378749
OBOO01128401
113700
Alphaproteobacteria
>WENV180378541
OBOO01065543
339454
Alphaproteobacteria
>WENV180378203
OBOO01012049
148425
Alphaproteobacteria
ACG
Arg
>WENV180378085
OBOO01003700
241518
Alphaproteobacteria
CCA
Trp
>WENV180378141
OBOO01006808
342876
Alphaproteobacteria
GAC
Val
>WENV180378143
OBOO01006971
342846
Alphaproteobacteria
GAC
Val
>WENV180378403
OBOO01038899
59164
Alphaproteobacteria
GAG
Leu
>WENV180378357
OBOO01032079
147083
Alphaproteobacteria
GGG
Pro
>WENV180378863
OBOO01182157
339750
Alphaproteobacteria
GGT
Thr
>WENV180378125
OBOO01006138
242540
Alphaproteobacteria
TGC
Ala
>WENV180378576
OBOO01073999
235430
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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