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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180394306
OBPS01000876
140876
Alphaproteobacteria
>WENV180394441
OBPS01005575
178510
Alphaproteobacteria
ACG
Arg
>WENV180394919
OBPS01175704
140893
Alphaproteobacteria
CAA
Leu
>WENV180394431
OBPS01005095
398995
Alphaproteobacteria
CAC
Val
>WENV180394562
OBPS01017764
180029
Alphaproteobacteria
CAT
Met
>WENV180394647
OBPS01031171
176153
Alphaproteobacteria
CAT
Met
>WENV180394338
OBPS01001490
281650
Alphaproteobacteria
CCA
Trp
>WENV180394289
OBPS01000528
353624
Alphaproteobacteria
CCA
Trp
>WENV180394692
OBPS01041411
296763
Alphaproteobacteria
CCA
Trp
>WENV180394554
OBPS01016639
179638
Alphaproteobacteria
CCG
Arg
>WENV180394287
OBPS01000506
178728
Alphaproteobacteria
CGG
Pro
>WENV180394498
OBPS01010781
340918
Alphaproteobacteria
CGT
Thr
>WENV180394302
OBPS01000835
399480
Alphaproteobacteria
GAA
Phe
>WENV180394583
OBPS01021055
400848
Alphaproteobacteria
GAC
Val
>WENV180394332
OBPS01001348
73490
Alphaproteobacteria
GAG
Leu
>WENV180394373
OBPS01002611
481326
Alphaproteobacteria
GCA
Cys
>WENV180394359
OBPS01002144
398996
Alphaproteobacteria
GCC
Gly
>WENV180394734
OBPS01052716
29729
Alphaproteobacteria
GCT
Ser
>WENV180394730
OBPS01051933
29495
Alphaproteobacteria
GCT
Ser
>WENV180394584
OBPS01021087
178503
Alphaproteobacteria
GGG
Pro
>WENV180394677
OBPS01037682
398994
Alphaproteobacteria
GTT
Asn
>WENV180394622
OBPS01028159
298198
Alphaproteobacteria
TAC
Val
>WENV180394644
OBPS01030374
143406
Alphaproteobacteria
TAG
Leu
>WENV180394272
OBPS01000218
482973
Alphaproteobacteria
TCC
Gly
>WENV180394538
OBPS01014399
481268
Alphaproteobacteria
TCC
Gly
>WENV180394288
OBPS01000519
190609
Alphaproteobacteria
TCT
Arg
>WENV180394337
OBPS01001459
335303
Alphaproteobacteria
TGC
Ala
>WENV180394507
OBPS01011436
179390
Alphaproteobacteria
TGG
Pro
>WENV180394537
OBPS01014145
283257
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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