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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182555410
OJDA01000197
377852
Alphaproteobacteria
TGT
Thr
>WENV182555416
OJDA01000249
319925
Alphaproteobacteria
TGT
Thr
>WENV182555428
OJDA01000385
339723
Alphaproteobacteria
>WENV182555431
OJDA01000473
113715
Alphaproteobacteria
TAG
Leu
>WENV182555432
OJDA01000493
338283
Alphaproteobacteria
CAC
Val
>WENV182555434
OJDA01000510
338760
Alphaproteobacteria
GAA
Phe
>WENV182555435
OJDA01000566
412279
Alphaproteobacteria
CCC
Gly
>WENV182555439
OJDA01000748
59164
Alphaproteobacteria
GAG
Leu
>WENV182555441
OJDA01000794
113716
Alphaproteobacteria
CAA
Leu
>WENV182555442
OJDA01000864
306070
Alphaproteobacteria
CCA
Trp
>WENV182555444
OJDA01000912
147334
Alphaproteobacteria
CAT
Met
>WENV182555445
OJDA01000917
80918
Alphaproteobacteria
GAG
Leu
>WENV182555452
OJDA01001005
152248
Alphaproteobacteria
TGG
Pro
>WENV182555460
OJDA01001567
338288
Alphaproteobacteria
TTC
Glu
>WENV182555463
OJDA01001767
28682
Alphaproteobacteria
GGA
Ser
>WENV182555466
OJDA01002381
113700
Alphaproteobacteria
>WENV182555469
OJDA01002617
412477
Alphaproteobacteria
GCA
Cys
>WENV182555472
OJDA01002651
80917
Alphaproteobacteria
CAG
Leu
>WENV182555474
OJDA01002961
157999
Alphaproteobacteria
TCT
Arg
>WENV182555475
OJDA01003056
236256
Alphaproteobacteria
TAC
Val
>WENV182555476
OJDA01003317
338282
Alphaproteobacteria
GTT
Asn
>WENV182555478
OJDA01003398
23671
Alphaproteobacteria
CGA
Ser
>WENV182555491
OJDA01006017
339606
Alphaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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