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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182563791
OJED01000057
21542
Alphaproteobacteria
GGA
Ser
>WENV182563795
OJED01000087
76208
Alphaproteobacteria
CAG
Leu
>WENV182563799
OJED01000119
282981
Alphaproteobacteria
CCA
Trp
>WENV182563806
OJED01000152
469211
Alphaproteobacteria
>WENV182563808
OJED01000161
183632
Alphaproteobacteria
GGG
Pro
>WENV182563807
OJED01000161
216373
Alphaproteobacteria
TGG
Pro
>WENV182563810
OJED01000174
481099
Alphaproteobacteria
TCC
Gly
>WENV182563813
OJED01000178
481802
Alphaproteobacteria
TCC
Gly
>WENV182563814
OJED01000182
288727
Alphaproteobacteria
>WENV182563824
OJED01000347
118150
Alphaproteobacteria
TAG
Leu
>WENV182563855
OJED01000868
178733
Alphaproteobacteria
CAT
Met
>WENV182563856
OJED01000868
216373
Alphaproteobacteria
TGG
Pro
>WENV182563859
OJED01000894
281409
Alphaproteobacteria
TTT
Lys
>WENV182563865
OJED01000931
190625
Alphaproteobacteria
ACG
Arg
>WENV182563867
OJED01000958
282977
Alphaproteobacteria
CAT
Met
>WENV182563868
OJED01000965
178731
Alphaproteobacteria
GTC
Asp
>WENV182563871
OJED01001018
400515
Alphaproteobacteria
GAC
Val
>WENV182563873
OJED01001115
281676
Alphaproteobacteria
TAC
Val
>WENV182563876
OJED01001145
73523
Alphaproteobacteria
CAG
Leu
>WENV182563877
OJED01001156
118150
Alphaproteobacteria
TAG
Leu
>WENV182563879
OJED01001260
102909
Alphaproteobacteria
GTA
Tyr
>WENV182563893
OJED01001585
296698
Alphaproteobacteria
CGC
Ala
>WENV182563898
OJED01001785
427571
Alphaproteobacteria
GCC
Gly
>WENV182563899
OJED01001833
398996
Alphaproteobacteria
GCC
Gly
>WENV182563901
OJED01001919
480900
Alphaproteobacteria
GCA
Cys
>WENV182563906
OJED01002365
481326
Alphaproteobacteria
GCA
Cys
>WENV182563923
OJED01003042
400514
Alphaproteobacteria
TTG
Gln
>WENV182563925
OJED01003097
399000
Alphaproteobacteria
TTC
Glu
>WENV182563937
OJED01004134
296698
Alphaproteobacteria
CGC
Ala
>WENV182563938
OJED01004301
140892
Alphaproteobacteria
TAG
Leu
>WENV182563940
OJED01004479
283510
Alphaproteobacteria
TTT
Lys
>WENV182563941
OJED01004487
190609
Alphaproteobacteria
TCT
Arg
>WENV182563945
OJED01004660
178503
Alphaproteobacteria
GGG
Pro
>WENV182563948
OJED01004863
180029
Alphaproteobacteria
CAT
Met
>WENV182563949
OJED01004954
281650
Alphaproteobacteria
CCA
Trp
>WENV182563954
OJED01005469
400517
Alphaproteobacteria
GGT
Thr
>WENV182563956
OJED01005756
29727
Alphaproteobacteria
CGA
Ser
>WENV182563958
OJED01005847
481098
Alphaproteobacteria
CTG
Gln
>WENV182563967
OJED01008173
481096
Alphaproteobacteria
CCC
Gly
>WENV182563971
OJED01009041
178509
Alphaproteobacteria
CCT
Arg
>WENV182563986
OJED01013542
29841
Alphaproteobacteria
GGA
Ser
>WENV182563987
OJED01013612
140876
Alphaproteobacteria
>WENV182563989
OJED01013689
179720
Alphaproteobacteria
TGG
Pro
>WENV182563999
OJED01016063
140893
Alphaproteobacteria
CAA
Leu
>WENV182564003
OJED01017220
432650
Alphaproteobacteria
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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