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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183513488
OMKS01005435
489502
Alphaproteobacteria
GCA
Cys
>WENV183515741
OMKS01089531
489502
Alphaproteobacteria
GCA
Cys
>WENV183512542
OMKS01000706
404641
Alphaproteobacteria
CAC
Val
>WENV183514330
OMKS01016299
179639
Alphaproteobacteria
ACG
Arg
>WENV183512425
OMKS01000449
280861
Alphaproteobacteria
CTT
Lys
>WENV183513746
OMKS01007593
197241
Alphaproteobacteria
GGG
Pro
>WENV183512904
OMKS01001770
399480
Alphaproteobacteria
GAA
Phe
>WENV183515808
OMKS01095137
399480
Alphaproteobacteria
GAA
Phe
>WENV183513477
OMKS01005320
400384
Alphaproteobacteria
TTC
Glu
>WENV183515961
OMKS01112409
400384
Alphaproteobacteria
TTC
Glu
>WENV183513096
OMKS01002705
78115
Alphaproteobacteria
GAG
Leu
>WENV183513433
OMKS01004891
408543
Alphaproteobacteria
GAC
Val
>WENV183512490
OMKS01000603
140932
Alphaproteobacteria
>WENV183516285
OMKS01152862
281409
Alphaproteobacteria
TTT
Lys
>WENV183512445
OMKS01000488
29727
Alphaproteobacteria
CGA
Ser
>WENV183513025
OMKS01002413
398994
Alphaproteobacteria
GTT
Asn
>WENV183513091
OMKS01002682
29495
Alphaproteobacteria
GCT
Ser
>WENV183512903
OMKS01001770
413432
Alphaproteobacteria
GGT
Thr
>WENV183513574
OMKS01005999
205112
Alphaproteobacteria
CCT
Arg
>WENV183514781
OMKS01031556
205112
Alphaproteobacteria
CCT
Arg
>WENV183515964
OMKS01112539
205112
Alphaproteobacteria
CCT
Arg
>WENV183515249
OMKS01053674
205361
Alphaproteobacteria
TCT
Arg
>WENV183516152
OMKS01137905
400693
Alphaproteobacteria
GCC
Gly
>WENV183512625
OMKS01000922
283257
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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