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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183615299
OOEB01001535
78115
Alphaproteobacteria
GAG
Leu
>WENV183615779
OOEB01144330
178734
Alphaproteobacteria
TGG
Pro
>WENV183615627
OOEB01065514
121250
Alphaproteobacteria
TAG
Leu
>WENV183615778
OOEB01144330
178733
Alphaproteobacteria
CAT
Met
>WENV183615774
OOEB01142729
427571
Alphaproteobacteria
GCC
Gly
>WENV183615367
OOEB01008310
33571
Alphaproteobacteria
TGA
Ser
>WENV183615488
OOEB01024759
400517
Alphaproteobacteria
GGT
Thr
>WENV183615798
OOEB01153753
481098
Alphaproteobacteria
CTG
Gln
>WENV183615816
OOEB01161387
400515
Alphaproteobacteria
GAC
Val
>WENV183615804
OOEB01156076
228432
Alphaproteobacteria
TGG
Pro
>WENV183615671
OOEB01086094
281676
Alphaproteobacteria
TAC
Val
>WENV183615415
OOEB01014033
345907
Alphaproteobacteria
CGT
Thr
>WENV183615707
OOEB01101422
282981
Alphaproteobacteria
CCA
Trp
>WENV183615402
OOEB01012609
178784
Alphaproteobacteria
CAT
Met
>WENV183615414
OOEB01014033
480900
Alphaproteobacteria
GCA
Cys
>WENV183615474
OOEB01023011
32370
Alphaproteobacteria
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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