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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183617079
OOEE01048379
190614
Alphaproteobacteria
TGG
Pro
>WENV183616929
OOEE01012301
193463
Alphaproteobacteria
CCT
Arg
>WENV183617166
OOEE01081049
201940
Alphaproteobacteria
CAT
Met
>WENV183617097
OOEE01055715
412252
Alphaproteobacteria
TTT
Lys
>WENV183616915
OOEE01010016
78115
Alphaproteobacteria
GAG
Leu
>WENV183617180
OOEE01084179
178734
Alphaproteobacteria
TGG
Pro
>WENV183617006
OOEE01027339
121250
Alphaproteobacteria
TAG
Leu
>WENV183617260
OOEE01131239
427571
Alphaproteobacteria
GCC
Gly
>WENV183617231
OOEE01108143
32420
Alphaproteobacteria
CGA
Ser
>WENV183617007
OOEE01027555
481326
Alphaproteobacteria
GCA
Cys
>WENV183616988
OOEE01022942
215287
Alphaproteobacteria
GGG
Pro
>WENV183616865
OOEE01004835
329227
Alphaproteobacteria
TGC
Ala
>WENV183617128
OOEE01066013
281676
Alphaproteobacteria
TAC
Val
>WENV183617082
OOEE01048918
178784
Alphaproteobacteria
CAT
Met
>WENV183617192
OOEE01088306
480900
Alphaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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