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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183736332
PJUC01000825
106524
Alphaproteobacteria
GTA
Tyr
>WENV183736350
PJUC01000981
106524
Alphaproteobacteria
GTA
Tyr
>WENV183736564
PJUC01013515
194696
Alphaproteobacteria
TCG
Arg
>WENV183736546
PJUC01011570
185194
Alphaproteobacteria
TCT
Arg
>WENV183736670
PJUC01038404
293747
Alphaproteobacteria
CTT
Lys
>WENV183736366
PJUC01001203
481305
Alphaproteobacteria
CTG
Gln
>WENV183736612
PJUC01023139
402731
Alphaproteobacteria
TTG
Gln
>WENV183736333
PJUC01000846
281231
Alphaproteobacteria
GTG
His
>WENV183736352
PJUC01001004
281235
Alphaproteobacteria
CGC
Ala
>WENV183736360
PJUC01001094
184194
Alphaproteobacteria
CCT
Arg
>WENV183736363
PJUC01001175
35703
Alphaproteobacteria
CGA
Ser
>WENV183736348
PJUC01000969
399238
Alphaproteobacteria
CGT
Thr
>WENV183736362
PJUC01001125
119367
Alphaproteobacteria
TAG
Leu
>WENV183736609
PJUC01022660
355084
Alphaproteobacteria
CGT
Thr
>WENV183736665
PJUC01037898
118100
Alphaproteobacteria
GTA
Tyr
>WENV183736384
PJUC01001664
289359
Alphaproteobacteria
TTC
Glu
>WENV183736443
PJUC01003694
289359
Alphaproteobacteria
TTC
Glu
>WENV183736622
PJUC01025823
401165
Alphaproteobacteria
CAC
Val
>WENV183736608
PJUC01022452
282960
Alphaproteobacteria
CCA
Trp
>WENV183736337
PJUC01000891
24546
Alphaproteobacteria
GGA
Ser
>WENV183736421
PJUC01002838
155778
Alphaproteobacteria
TGG
Pro
>WENV183736446
PJUC01003957
176634
Alphaproteobacteria
CGG
Pro
>WENV183736552
PJUC01012501
176634
Alphaproteobacteria
CGG
Pro
>WENV183736553
PJUC01012501
176634
Alphaproteobacteria
CGG
Pro
>WENV183736294
PJUC01000451
281232
Alphaproteobacteria
GTT
Asn
>WENV183736342
PJUC01000917
281232
Alphaproteobacteria
GTT
Asn
>WENV183736419
PJUC01002771
281238
Alphaproteobacteria
CAT
Met
>WENV183736424
PJUC01002921
195597
Alphaproteobacteria
GGG
Pro
>WENV183736606
PJUC01022077
178252
Alphaproteobacteria
TGG
Pro
>WENV183736336
PJUC01000859
399210
Alphaproteobacteria
CAT
Met
>WENV183736434
PJUC01003366
447674
Alphaproteobacteria
CAC
Val
>WENV183736587
PJUC01018101
354296
Alphaproteobacteria
TAC
Val
>WENV183736509
PJUC01007478
415537
Alphaproteobacteria
>WENV183736597
PJUC01019328
176633
Alphaproteobacteria
GAT
Ile
>WENV183736634
PJUC01027483
176633
Alphaproteobacteria
GAT
Ile
>WENV183736637
PJUC01027839
176633
Alphaproteobacteria
GAT
Ile
>WENV183736387
PJUC01001698
296763
Alphaproteobacteria
CCA
Trp
>WENV183736451
PJUC01004345
73735
Alphaproteobacteria
CAG
Leu
>WENV183736673
PJUC01038784
73735
Alphaproteobacteria
CAG
Leu
>WENV183736420
PJUC01002838
284374
Alphaproteobacteria
TTT
Lys
>WENV183736422
PJUC01002838
184192
Alphaproteobacteria
TCT
Arg
>WENV183736341
PJUC01000917
480507
Alphaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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