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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV082787
BAAW01001013
145383
Bacillota
TCT
Arg
>WENV082788
BAAW01001013
279635
Bacillota
GTG
His
>WENV082789
BAAW01001013
338548
Bacillota
TTG
Gln
>WENV082790
BAAW01001013
235903
Bacillota
TTT
Lys
>WENV082791
BAAW01001013
339904
Bacillota
GCC
Gly
>WENV082792
BAAW01001013
411739
Bacillota
TCC
Gly
>WENV082812
BAAW01001652
235506
Bacillota
TGC
Ala
>WENV082814
BAAW01001760
338555
Bacillota
CCT
Arg
>WENV082815
BAAW01001776
235506
Bacillota
TGC
Ala
>WENV082823
BAAW01002289
106802
Bacillota
GTA
Tyr
>WENV082824
BAAW01002289
338544
Bacillota
TGT
Thr
>WENV082825
BAAW01002289
312468
Bacillota
TAC
Val
>WENV082826
BAAW01002289
106802
Bacillota
GTA
Tyr
>WENV082839
BAAW01003652
81636
Bacillota
>WENV082880
BAAW01009476
243345
Bacillota
GAA
Phe
>WENV082920
BAAW01012386
235903
Bacillota
TTT
Lys
>WENV082923
BAAW01012387
147692
Bacillota
TCG
Arg
>WENV082930
BAAW01013058
367412
Bacillota
GTT
Asn
>WENV082968
BAAW01016331
238413
Bacillota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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