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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170065477
CDZM01003391
221826
Bacillota
ACG
Arg
>WENV170065399
CDZM01000360
287289
Bacillota
GCC
Gly
>WENV170065483
CDZM01003819
287289
Bacillota
GCC
Gly
>WENV170065567
CDZM01007193
215243
Bacillota
CAT
Met
>WENV170065679
CDZM01013051
407726
Bacillota
CTG
Gln
>WENV170065965
CDZM01024704
407726
Bacillota
CTG
Gln
>WENV170065480
CDZM01003790
398835
Bacillota
GCC
Gly
>WENV170065515
CDZM01005114
398835
Bacillota
GCC
Gly
>WENV170065585
CDZM01008405
398835
Bacillota
GCC
Gly
>WENV170065625
CDZM01010531
398835
Bacillota
GCC
Gly
>WENV170065918
CDZM01023441
398835
Bacillota
GCC
Gly
>WENV170065935
CDZM01024061
398835
Bacillota
GCC
Gly
>WENV170065503
CDZM01004692
73638
Bacillota
AAG
Leu
>WENV170065397
CDZM01000360
175911
Bacillota
GTC
Asp
>WENV170065544
CDZM01006229
175911
Bacillota
GTC
Asp
>WENV170065538
CDZM01006229
292374
Bacillota
TGC
Ala
>WENV170065711
CDZM01014659
280476
Bacillota
TTT
Lys
>WENV170065422
CDZM01001108
332651
Bacillota
GTT
Asn
>WENV170065497
CDZM01004222
332651
Bacillota
GTT
Asn
>WENV170065956
CDZM01024419
332651
Bacillota
GTT
Asn
>WENV170065537
CDZM01006229
201856
Bacillota
GAT
Ile
>WENV170065427
CDZM01001108
321248
Bacillota
TAC
Val
>WENV170065590
CDZM01008744
321248
Bacillota
TAC
Val
>WENV170065933
CDZM01024056
321248
Bacillota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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