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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170676246
LDZR01001850
288760
Bacillota
GGT
Thr
>WENV170676224
LDZR01001816
288756
Bacillota
CAT
Met
>WENV170676250
LDZR01001871
183664
Bacillota
CCT
Arg
>WENV170676227
LDZR01001817
288761
Bacillota
CTC
Glu
>WENV170676012
LDZR01000023
48505
Bacillota
TGA
Ser
>WENV170676247
LDZR01001856
403602
Bacillota
CGG
Pro
>WENV170676426
LDZR01002631
412530
Bacillota
GAC
Val
>WENV170676234
LDZR01001825
288762
Bacillota
GGG
Pro
>WENV170676254
LDZR01001872
306963
Bacillota
GAA
Phe
>WENV170676257
LDZR01001874
288763
Bacillota
TGT
Thr
>WENV170676233
LDZR01001824
286200
Bacillota
GGC
Ala
>WENV170676033
LDZR01000364
302381
Bacillota
CTC
Glu
>WENV170676253
LDZR01001872
184475
Bacillota
GTC
Asp
>WENV170676009
LDZR01000003
302387
Bacillota
GGT
Thr
>WENV170676414
LDZR01002584
302387
Bacillota
GGT
Thr
>WENV170676212
LDZR01001726
195855
Bacillota
GTC
Asp
>WENV170676220
LDZR01001787
195856
Bacillota
CCG
Arg
>WENV170676226
LDZR01001817
482397
Bacillota
CTG
Gln
>WENV170676232
LDZR01001822
200290
Bacillota
CAT
Met
>WENV170676242
LDZR01001829
306966
Bacillota
CTT
Lys
>WENV170676223
LDZR01001816
403603
Bacillota
GTT
Asn
>WENV170676248
LDZR01001867
403603
Bacillota
GTT
Asn
>WENV170676239
LDZR01001829
286198
Bacillota
TTT
Lys
>WENV170676264
LDZR01001926
286198
Bacillota
TTT
Lys
>WENV170676245
LDZR01001844
403605
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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