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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
61 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180118497
OASD01000018
482407
Bacillota
TCC
Gly
>WENV180118536
OASD01000041
176016
Bacillota
CAT
Met
>WENV180118649
OASD01000237
176016
Bacillota
CAT
Met
>WENV180118682
OASD01000354
184522
Bacillota
CCT
Arg
>WENV180118689
OASD01000374
284389
Bacillota
CTT
Lys
>WENV180118713
OASD01000476
338977
Bacillota
CTT
Lys
>WENV180118718
OASD01000532
400904
Bacillota
CCT
Arg
>WENV180118727
OASD01000573
178152
Bacillota
GTT
Asn
>WENV180118795
OASD01000947
183995
Bacillota
GGG
Pro
>WENV180118829
OASD01001283
74725
Bacillota
CAG
Leu
>WENV180118830
OASD01001283
13634
Bacillota
CGA
Ser
>WENV180118831
OASD01001284
280492
Bacillota
CTT
Lys
>WENV180118861
OASD01002033
289476
Bacillota
CGT
Thr
>WENV180118867
OASD01002096
100999
Bacillota
GAG
Leu
>WENV180118895
OASD01002758
179563
Bacillota
GAT
Ile
>WENV180118910
OASD01003058
403766
Bacillota
TTG
Gln
>WENV180118941
OASD01003649
47166
Bacillota
CGA
Ser
>WENV180118950
OASD01003951
398852
Bacillota
CTC
Glu
>WENV180118951
OASD01003965
398852
Bacillota
CTC
Glu
>WENV180118953
OASD01004012
289147
Bacillota
GTT
Asn
>WENV180118954
OASD01004012
289472
Bacillota
TTC
Glu
>WENV180118955
OASD01004012
292612
Bacillota
TAC
Val
>WENV180118964
OASD01004284
184455
Bacillota
GTC
Asp
>WENV180118966
OASD01004284
404126
Bacillota
GCC
Gly
>WENV180118967
OASD01004284
489283
Bacillota
GCA
Cys
>WENV180118968
OASD01004284
48832
Bacillota
TAA
Leu
>WENV180118974
OASD01004526
56079
Bacillota
AAG
Leu
>WENV180118994
OASD01005273
284680
Bacillota
TTT
Lys
>WENV180118997
OASD01005273
398935
Bacillota
>WENV180118998
OASD01005273
51970
Bacillota
TAA
Leu
>WENV180118999
OASD01005273
179130
Bacillota
ACG
Arg
>WENV180119007
OASD01005273
179563
Bacillota
GAT
Ile
>WENV180119053
OASD01007282
20913
Bacillota
GCT
Ser
>WENV180119057
OASD01007568
398852
Bacillota
CTC
Glu
>WENV180119075
OASD01008441
292612
Bacillota
TAC
Val
>WENV180119082
OASD01009046
73664
Bacillota
CAG
Leu
>WENV180119099
OASD01010649
15649
Bacillota
GGA
Ser
>WENV180119103
OASD01010657
175857
Bacillota
GTG
His
>WENV180119105
OASD01010657
280463
Bacillota
TTT
Lys
>WENV180119126
OASD01011874
284390
Bacillota
CGT
Thr
>WENV180119150
OASD01014039
101000
Bacillota
GTA
Tyr
>WENV180119152
OASD01014039
289149
Bacillota
GGT
Thr
>WENV180119153
OASD01014039
183993
Bacillota
CAT
Met
>WENV180119167
OASD01015592
184523
Bacillota
GAC
Val
>WENV180119188
OASD01018936
280427
Bacillota
TAC
Val
>WENV180119190
OASD01018936
280428
Bacillota
GAA
Phe
>WENV180119240
OASD01024244
175899
Bacillota
GTC
Asp
>WENV180119249
OASD01026017
284391
Bacillota
GTG
His
>WENV180119268
OASD01028807
482078
Bacillota
CCC
Gly
>WENV180119351
OASD01049708
291581
Bacillota
CGG
Pro
>WENV180119352
OASD01049966
284101
Bacillota
GTC
Asp
>WENV180119353
OASD01049966
283719
Bacillota
GAA
Phe
>WENV180119354
OASD01049966
105208
Bacillota
GTA
Tyr
>WENV180119359
OASD01051141
117745
Bacillota
GTA
Tyr
>WENV180119378
OASD01057779
231532
Bacillota
ACG
Arg
>WENV180119394
OASD01064638
287380
Bacillota
CTT
Lys
>WENV180119395
OASD01065173
295166
Bacillota
TGC
Ala
>WENV180119409
OASD01070161
280500
Bacillota
TGC
Ala
>WENV180119426
OASD01077350
100999
Bacillota
GAG
Leu
>WENV180119432
OASD01085220
400905
Bacillota
CCG
Arg
>WENV180119434
OASD01090173
418726
Bacillota
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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