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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
52 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180185825
OAWU01000219
118683
Bacillota
GTA
Tyr
>WENV180186141
OAWU01002382
184537
Bacillota
ACG
Arg
>WENV180186295
OAWU01018556
408526
Bacillota
GCA
Cys
>WENV180185627
OAWU01000001
356660
Bacillota
CTT
Lys
>WENV180186225
OAWU01006291
296855
Bacillota
GGT
Thr
>WENV180185807
OAWU01000181
289717
Bacillota
CTT
Lys
>WENV180186015
OAWU01000957
289717
Bacillota
CTT
Lys
>WENV180185907
OAWU01000430
400140
Bacillota
TTC
Glu
>WENV180186197
OAWU01004201
400140
Bacillota
TTC
Glu
>WENV180185777
OAWU01000149
20932
Bacillota
GCT
Ser
>WENV180186071
OAWU01001459
20932
Bacillota
GCT
Ser
>WENV180185706
OAWU01000055
291553
Bacillota
GAA
Phe
>WENV180185803
OAWU01000171
291553
Bacillota
GAA
Phe
>WENV180186205
OAWU01005017
482593
Bacillota
CCC
Gly
>WENV180186229
OAWU01006660
339995
Bacillota
TGC
Ala
>WENV180186244
OAWU01008427
339995
Bacillota
TGC
Ala
>WENV180186258
OAWU01009747
339995
Bacillota
TGC
Ala
>WENV180185801
OAWU01000171
20942
Bacillota
GGA
Ser
>WENV180185938
OAWU01000520
20942
Bacillota
GGA
Ser
>WENV180186226
OAWU01006291
184495
Bacillota
CAT
Met
>WENV180185688
OAWU01000045
141202
Bacillota
CAA
Leu
>WENV180185981
OAWU01000707
141202
Bacillota
CAA
Leu
>WENV180185908
OAWU01000430
297381
Bacillota
TAC
Val
>WENV180185658
OAWU01000023
510876
Bacillota
GGT
Thr
>WENV180185626
OAWU01000001
332864
Bacillota
CTT
Lys
>WENV180185692
OAWU01000047
137739
Bacillota
TAG
Leu
>WENV180186000
OAWU01000894
293309
Bacillota
GTT
Asn
>WENV180186222
OAWU01006291
289713
Bacillota
TGT
Thr
>WENV180185784
OAWU01000161
404091
Bacillota
TTG
Gln
>WENV180185783
OAWU01000161
289716
Bacillota
GTG
His
>WENV180186231
OAWU01007060
53200
Bacillota
TAA
Leu
>WENV180185869
OAWU01000311
432453
Bacillota
TTC
Glu
>WENV180185709
OAWU01000055
480337
Bacillota
TCC
Gly
>WENV180185914
OAWU01000444
480337
Bacillota
TCC
Gly
>WENV180186020
OAWU01000997
119459
Bacillota
TAG
Leu
>WENV180186045
OAWU01001172
119459
Bacillota
TAG
Leu
>WENV180186261
OAWU01009822
376566
Bacillota
GTG
His
>WENV180185868
OAWU01000311
333281
Bacillota
GTT
Asn
>WENV180185705
OAWU01000055
280547
Bacillota
GTC
Asp
>WENV180185802
OAWU01000171
280547
Bacillota
GTC
Asp
>WENV180185999
OAWU01000894
445407
Bacillota
GCC
Gly
>WENV180186304
OAWU01018969
445407
Bacillota
GCC
Gly
>WENV180185785
OAWU01000161
289761
Bacillota
TTT
Lys
>WENV180186001
OAWU01000894
289761
Bacillota
TTT
Lys
>WENV180185870
OAWU01000311
289715
Bacillota
TAC
Val
>WENV180185704
OAWU01000055
20943
Bacillota
CGA
Ser
>WENV180186108
OAWU01001881
20943
Bacillota
CGA
Ser
>WENV180186196
OAWU01004201
8724
Bacillota
GCT
Ser
>WENV180185708
OAWU01000055
208539
Bacillota
TGG
Pro
>WENV180185913
OAWU01000444
208539
Bacillota
TGG
Pro
>WENV180185710
OAWU01000055
184539
Bacillota
TCT
Arg
>WENV180185915
OAWU01000444
184539
Bacillota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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