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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
77 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180191015
OAXB01000118
24650
Bacillota
TAA
Leu
>WENV180191293
OAXB01017310
243647
Bacillota
TTT
Lys
>WENV180191155
OAXB01001675
361659
Bacillota
GCC
Gly
>WENV180191310
OAXB01020011
361659
Bacillota
GCC
Gly
>WENV180191324
OAXB01023067
37110
Bacillota
TAA
Leu
>WENV180191174
OAXB01002912
16842
Bacillota
CGA
Ser
>WENV180191065
OAXB01000297
202812
Bacillota
CAT
Met
>WENV180191256
OAXB01010857
339904
Bacillota
GCC
Gly
>WENV180191260
OAXB01011375
267649
Bacillota
TAC
Val
>WENV180190934
OAXB01000029
267649
Bacillota
TAC
Val
>WENV180190932
OAXB01000029
267649
Bacillota
TAC
Val
>WENV180191127
OAXB01000764
241441
Bacillota
GCC
Gly
>WENV180191097
OAXB01000460
241441
Bacillota
GCC
Gly
>WENV180191354
OAXB01030184
16285
Bacillota
GCT
Ser
>WENV180191309
OAXB01020011
114359
Bacillota
TAG
Leu
>WENV180191349
OAXB01026524
391536
Bacillota
TTC
Glu
>WENV180191258
OAXB01010857
293599
Bacillota
CTT
Lys
>WENV180191254
OAXB01010857
235903
Bacillota
TTT
Lys
>WENV180191186
OAXB01004404
341763
Bacillota
CTC
Glu
>WENV180191259
OAXB01011375
144668
Bacillota
GTC
Asp
>WENV180191013
OAXB01000118
144668
Bacillota
GTC
Asp
>WENV180191123
OAXB01000753
429429
Bacillota
CCA
Trp
>WENV180191264
OAXB01011375
313454
Bacillota
GAA
Phe
>WENV180191227
OAXB01006933
16834
Bacillota
GCT
Ser
>WENV180191319
OAXB01020778
186380
Bacillota
GTC
Asp
>WENV180191275
OAXB01012085
186380
Bacillota
GTC
Asp
>WENV180191220
OAXB01005579
444721
Bacillota
TCC
Gly
>WENV180191292
OAXB01017310
243646
Bacillota
GTT
Asn
>WENV180191270
OAXB01011861
114002
Bacillota
CAA
Leu
>WENV180191372
OAXB01037506
338550
Bacillota
>WENV180191350
OAXB01026524
243612
Bacillota
TAC
Val
>WENV180191195
OAXB01005383
316443
Bacillota
GTC
Asp
>WENV180191175
OAXB01002959
258936
Bacillota
GGT
Thr
>WENV180191105
OAXB01000515
258936
Bacillota
GGT
Thr
>WENV180191045
OAXB01000230
413152
Bacillota
TCC
Gly
>WENV180191215
OAXB01005579
411585
Bacillota
GCA
Cys
>WENV180191229
OAXB01007090
147135
Bacillota
ACG
Arg
>WENV180191253
OAXB01010857
338548
Bacillota
TTG
Gln
>WENV180191274
OAXB01012085
263765
Bacillota
TAC
Val
>WENV180191342
OAXB01024780
193665
Bacillota
GTC
Asp
>WENV180191265
OAXB01011375
313164
Bacillota
TTT
Lys
>WENV180191082
OAXB01000360
313164
Bacillota
TTT
Lys
>WENV180191375
OAXB01037699
198159
Bacillota
CAT
Met
>WENV180191304
OAXB01019718
198159
Bacillota
CAT
Met
>WENV180191157
OAXB01001675
150597
Bacillota
TCT
Arg
>WENV180191312
OAXB01020192
292025
Bacillota
TGG
Pro
>WENV180191182
OAXB01003854
292025
Bacillota
TGG
Pro
>WENV180191209
OAXB01005579
42270
Bacillota
>WENV180191213
OAXB01005579
144767
Bacillota
GTG
His
>WENV180191360
OAXB01034436
110221
Bacillota
GTA
Tyr
>WENV180191247
OAXB01010497
235197
Bacillota
GTC
Asp
>WENV180191291
OAXB01017310
368876
Bacillota
GCC
Gly
>WENV180191079
OAXB01000360
147674
Bacillota
TCT
Arg
>WENV180191252
OAXB01010857
235905
Bacillota
GTG
His
>WENV180191197
OAXB01005383
113225
Bacillota
TAG
Leu
>WENV180191339
OAXB01024630
411739
Bacillota
TCC
Gly
>WENV180191313
OAXB01020192
411739
Bacillota
TCC
Gly
>WENV180191257
OAXB01010857
411739
Bacillota
TCC
Gly
>WENV180191243
OAXB01009644
411739
Bacillota
TCC
Gly
>WENV180191156
OAXB01001675
411739
Bacillota
TCC
Gly
>WENV180191374
OAXB01037552
235638
Bacillota
GAA
Phe
>WENV180191305
OAXB01019718
235506
Bacillota
TGC
Ala
>WENV180191297
OAXB01018148
163753
Bacillota
TGG
Pro
>WENV180191308
OAXB01020011
237963
Bacillota
TTT
Lys
>WENV180191340
OAXB01024630
201667
Bacillota
TCT
Arg
>WENV180191328
OAXB01023099
319167
Bacillota
CAT
Met
>WENV180191218
OAXB01005579
319167
Bacillota
CAT
Met
>WENV180191311
OAXB01020192
145383
Bacillota
TCT
Arg
>WENV180191251
OAXB01010857
145383
Bacillota
TCT
Arg
>WENV180191296
OAXB01018148
235292
Bacillota
CCA
Trp
>WENV180191273
OAXB01012085
353527
Bacillota
TTC
Glu
>WENV180191206
OAXB01005579
144762
Bacillota
TCT
Arg
>WENV180191255
OAXB01010857
95697
Bacillota
TAG
Leu
>WENV180191138
OAXB01001130
178024
Bacillota
TCT
Arg
>WENV180191317
OAXB01020778
338545
Bacillota
>WENV180191365
OAXB01037374
413657
Bacillota
CCC
Gly
>WENV180191238
OAXB01008270
256939
Bacillota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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