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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
131 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180215112
OBAQ01000186
303718
Bacillota
TGT
Thr
>WENV180215125
OBAQ01000202
398852
Bacillota
CTC
Glu
>WENV180215208
OBAQ01000275
175857
Bacillota
GTG
His
>WENV180215210
OBAQ01000275
280463
Bacillota
TTT
Lys
>WENV180215242
OBAQ01000343
294020
Bacillota
TAC
Val
>WENV180215244
OBAQ01000344
117745
Bacillota
GTA
Tyr
>WENV180215257
OBAQ01000377
229015
Bacillota
GTG
His
>WENV180215256
OBAQ01000377
179810
Bacillota
TCT
Arg
>WENV180215262
OBAQ01000379
280492
Bacillota
CTT
Lys
>WENV180215298
OBAQ01000471
56079
Bacillota
AAG
Leu
>WENV180215324
OBAQ01000530
280462
Bacillota
GAA
Phe
>WENV180215334
OBAQ01000553
179917
Bacillota
CAT
Met
>WENV180215368
OBAQ01000664
73664
Bacillota
CAG
Leu
>WENV180215384
OBAQ01000723
284723
Bacillota
TAC
Val
>WENV180215462
OBAQ01001126
175857
Bacillota
GTG
His
>WENV180215494
OBAQ01001382
317482
Bacillota
TAC
Val
>WENV180215503
OBAQ01001427
398852
Bacillota
CTC
Glu
>WENV180215505
OBAQ01001428
309916
Bacillota
TTT
Lys
>WENV180215507
OBAQ01001432
73664
Bacillota
CAG
Leu
>WENV180215506
OBAQ01001432
56079
Bacillota
AAG
Leu
>WENV180215530
OBAQ01001675
280492
Bacillota
CTT
Lys
>WENV180215531
OBAQ01001676
118669
Bacillota
GTA
Tyr
>WENV180215583
OBAQ01002139
284627
Bacillota
GAA
Phe
>WENV180215598
OBAQ01002281
21311
Bacillota
GCT
Ser
>WENV180215690
OBAQ01003390
184497
Bacillota
GGG
Pro
>WENV180215740
OBAQ01004212
190476
Bacillota
CAT
Met
>WENV180215741
OBAQ01004212
398832
Bacillota
TTC
Glu
>WENV180215746
OBAQ01004289
290325
Bacillota
GCC
Gly
>WENV180215772
OBAQ01004752
303718
Bacillota
TGT
Thr
>WENV180215789
OBAQ01005064
179755
Bacillota
CCG
Arg
>WENV180215830
OBAQ01006134
175842
Bacillota
CAC
Val
>WENV180215833
OBAQ01006180
175831
Bacillota
ACG
Arg
>WENV180215846
OBAQ01006985
280444
Bacillota
GGT
Thr
>WENV180215854
OBAQ01007111
406553
Bacillota
TTG
Gln
>WENV180215863
OBAQ01007636
302145
Bacillota
GAA
Phe
>WENV180215901
OBAQ01009001
289123
Bacillota
GGT
Thr
>WENV180215906
OBAQ01009236
27216
Bacillota
GCT
Ser
>WENV180215908
OBAQ01009304
343590
Bacillota
GCC
Gly
>WENV180215909
OBAQ01009304
343590
Bacillota
GCC
Gly
>WENV180215914
OBAQ01009451
497729
Bacillota
CCA
Trp
>WENV180215915
OBAQ01009467
73009
Bacillota
CAG
Leu
>WENV180215921
OBAQ01009555
175831
Bacillota
ACG
Arg
>WENV180215941
OBAQ01011007
280646
Bacillota
TGC
Ala
>WENV180215949
OBAQ01011556
398833
Bacillota
TGT
Thr
>WENV180215958
OBAQ01012116
280447
Bacillota
GAC
Val
>WENV180215959
OBAQ01012124
280473
Bacillota
TGG
Pro
>WENV180215964
OBAQ01012538
401685
Bacillota
TTG
Gln
>WENV180215963
OBAQ01012538
175857
Bacillota
GTG
His
>WENV180215976
OBAQ01012907
312274
Bacillota
GGC
Ala
>WENV180216002
OBAQ01014478
330413
Bacillota
CTT
Lys
>WENV180216004
OBAQ01014674
280444
Bacillota
GGT
Thr
>WENV180216015
OBAQ01015364
5692
Bacillota
GCT
Ser
>WENV180216014
OBAQ01015364
56074
Bacillota
TGA
Ser
>WENV180216023
OBAQ01016124
179755
Bacillota
CCG
Arg
>WENV180216029
OBAQ01016309
280444
Bacillota
GGT
Thr
>WENV180216028
OBAQ01016309
175849
Bacillota
GTC
Asp
>WENV180216034
OBAQ01016374
117745
Bacillota
GTA
Tyr
>WENV180216036
OBAQ01016374
280462
Bacillota
GAA
Phe
>WENV180216037
OBAQ01016374
280463
Bacillota
TTT
Lys
>WENV180216040
OBAQ01016615
398854
Bacillota
CTC
Glu
>WENV180216043
OBAQ01016778
291576
Bacillota
CCC
Gly
>WENV180216049
OBAQ01016962
497729
Bacillota
CCA
Trp
>WENV180216059
OBAQ01017930
497729
Bacillota
CCA
Trp
>WENV180216064
OBAQ01018092
280447
Bacillota
GAC
Val
>WENV180216074
OBAQ01019077
175899
Bacillota
GTC
Asp
>WENV180216085
OBAQ01019782
175868
Bacillota
GTT
Asn
>WENV180216084
OBAQ01019782
398854
Bacillota
CTC
Glu
>WENV180216087
OBAQ01019881
280428
Bacillota
GAA
Phe
>WENV180216105
OBAQ01021528
175868
Bacillota
GTT
Asn
>WENV180216106
OBAQ01021832
480324
Bacillota
TTG
Gln
>WENV180216110
OBAQ01022836
175842
Bacillota
CAC
Val
>WENV180216111
OBAQ01022845
291581
Bacillota
CGG
Pro
>WENV180216124
OBAQ01024686
346451
Bacillota
TTT
Lys
>WENV180216125
OBAQ01024720
175868
Bacillota
GTT
Asn
>WENV180216134
OBAQ01025290
349107
Bacillota
GCC
Gly
>WENV180216135
OBAQ01025290
405363
Bacillota
GCA
Cys
>WENV180216149
OBAQ01027728
46835
Bacillota
TAA
Leu
>WENV180216161
OBAQ01029950
25955
Bacillota
GCT
Ser
>WENV180216166
OBAQ01030264
291634
Bacillota
GAA
Phe
>WENV180216172
OBAQ01031086
342104
Bacillota
TAC
Val
>WENV180216175
OBAQ01031697
189473
Bacillota
GAT
Ile
>WENV180216183
OBAQ01032966
291576
Bacillota
CCC
Gly
>WENV180216185
OBAQ01033367
349107
Bacillota
GCC
Gly
>WENV180216188
OBAQ01033605
236579
Bacillota
GAT
Ile
>WENV180216187
OBAQ01033605
295166
Bacillota
TGC
Ala
>WENV180216196
OBAQ01035395
280473
Bacillota
TGG
Pro
>WENV180216216
OBAQ01039243
73009
Bacillota
CAG
Leu
>WENV180216221
OBAQ01040002
73009
Bacillota
CAG
Leu
>WENV180216222
OBAQ01040004
73009
Bacillota
CAG
Leu
>WENV180216234
OBAQ01041842
291581
Bacillota
CGG
Pro
>WENV180216233
OBAQ01041842
480322
Bacillota
CTG
Gln
>WENV180216240
OBAQ01043185
398833
Bacillota
TGT
Thr
>WENV180216245
OBAQ01044123
280428
Bacillota
GAA
Phe
>WENV180216252
OBAQ01044667
349107
Bacillota
GCC
Gly
>WENV180216253
OBAQ01044667
280466
Bacillota
TAC
Val
>WENV180216254
OBAQ01044745
175831
Bacillota
ACG
Arg
>WENV180216279
OBAQ01047939
290325
Bacillota
GCC
Gly
>WENV180216289
OBAQ01051174
179755
Bacillota
CCG
Arg
>WENV180216294
OBAQ01052637
280428
Bacillota
GAA
Phe
>WENV180216295
OBAQ01052638
349107
Bacillota
GCC
Gly
>WENV180216296
OBAQ01052638
405363
Bacillota
GCA
Cys
>WENV180216299
OBAQ01052742
280444
Bacillota
GGT
Thr
>WENV180216298
OBAQ01052742
175849
Bacillota
GTC
Asp
>WENV180216303
OBAQ01053737
291629
Bacillota
CCA
Trp
>WENV180216308
OBAQ01055615
280473
Bacillota
TGG
Pro
>WENV180216312
OBAQ01056858
332891
Bacillota
TGC
Ala
>WENV180216314
OBAQ01057251
510477
Bacillota
TCC
Gly
>WENV180216315
OBAQ01057818
481217
Bacillota
GCA
Cys
>WENV180216322
OBAQ01059666
179755
Bacillota
CCG
Arg
>WENV180216336
OBAQ01063519
284723
Bacillota
TAC
Val
>WENV180216350
OBAQ01066294
175859
Bacillota
TCT
Arg
>WENV180216352
OBAQ01067023
175831
Bacillota
ACG
Arg
>WENV180216366
OBAQ01068942
200563
Bacillota
TGG
Pro
>WENV180216364
OBAQ01068942
176018
Bacillota
CAT
Met
>WENV180216371
OBAQ01070621
187589
Bacillota
CAT
Met
>WENV180216379
OBAQ01074003
280428
Bacillota
GAA
Phe
>WENV180216387
OBAQ01077647
398852
Bacillota
CTC
Glu
>WENV180216398
OBAQ01084108
398857
Bacillota
TTC
Glu
>WENV180216401
OBAQ01085101
314834
Bacillota
TGC
Ala
>WENV180216406
OBAQ01087461
349107
Bacillota
GCC
Gly
>WENV180216409
OBAQ01088035
280428
Bacillota
GAA
Phe
>WENV180216437
OBAQ01109670
280483
Bacillota
GAA
Phe
>WENV180216438
OBAQ01109670
285756
Bacillota
GCC
Gly
>WENV180216448
OBAQ01121164
497729
Bacillota
CCA
Trp
>WENV180216473
OBAQ01153612
175847
Bacillota
GTC
Asp
>WENV180216479
OBAQ01153901
175825
Bacillota
GAT
Ile
>WENV180216485
OBAQ01154887
280436
Bacillota
TGC
Ala
>WENV180216487
OBAQ01155003
280428
Bacillota
GAA
Phe
>WENV180216489
OBAQ01156406
73009
Bacillota
CAG
Leu
>WENV180216496
OBAQ01157598
280500
Bacillota
TGC
Ala
>WENV180216499
OBAQ01157654
480322
Bacillota
CTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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