This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
116 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180232734
OBCP01000003
280901
Bacillota
GTT
Asn
>WENV180232735
OBCP01000003
20285
Bacillota
GCT
Ser
>WENV180232738
OBCP01000003
480424
Bacillota
TCC
Gly
>WENV180232743
OBCP01000003
476007
Bacillota
GCC
Gly
>WENV180232744
OBCP01000003
46665
Bacillota
TAA
Leu
>WENV180232745
OBCP01000003
176250
Bacillota
ACG
Arg
>WENV180232748
OBCP01000003
176548
Bacillota
CAT
Met
>WENV180232749
OBCP01000003
176319
Bacillota
CAT
Met
>WENV180232750
OBCP01000003
8513
Bacillota
TGA
Ser
>WENV180232753
OBCP01000003
280900
Bacillota
GAA
Phe
>WENV180232754
OBCP01000003
362983
Bacillota
GTG
His
>WENV180232755
OBCP01000003
480424
Bacillota
TCC
Gly
>WENV180232757
OBCP01000003
280901
Bacillota
GTT
Asn
>WENV180232758
OBCP01000003
20242
Bacillota
GCT
Ser
>WENV180232760
OBCP01000005
99922
Bacillota
GAG
Leu
>WENV180232812
OBCP01000012
73066
Bacillota
GAG
Leu
>WENV180232814
OBCP01000012
176252
Bacillota
CGT
Thr
>WENV180232815
OBCP01000012
140790
Bacillota
GTA
Tyr
>WENV180232816
OBCP01000012
451446
Bacillota
TTG
Gln
>WENV180232820
OBCP01000012
280900
Bacillota
GAA
Phe
>WENV180232821
OBCP01000012
140790
Bacillota
GTA
Tyr
>WENV180232823
OBCP01000012
280895
Bacillota
GTG
His
>WENV180232825
OBCP01000012
399057
Bacillota
GCC
Gly
>WENV180232847
OBCP01000015
356660
Bacillota
CTT
Lys
>WENV180232848
OBCP01000015
356660
Bacillota
CTT
Lys
>WENV180232849
OBCP01000015
356660
Bacillota
CTT
Lys
>WENV180232851
OBCP01000017
8514
Bacillota
CGA
Ser
>WENV180232877
OBCP01000021
280902
Bacillota
GAC
Val
>WENV180232953
OBCP01000042
401881
Bacillota
CCT
Arg
>WENV180232956
OBCP01000042
478742
Bacillota
CCG
Arg
>WENV180233024
OBCP01000068
281300
Bacillota
GAA
Phe
>WENV180233025
OBCP01000068
399272
Bacillota
GCA
Cys
>WENV180233026
OBCP01000068
281307
Bacillota
GGT
Thr
>WENV180233027
OBCP01000068
117891
Bacillota
TAG
Leu
>WENV180233028
OBCP01000068
399273
Bacillota
CCC
Gly
>WENV180233038
OBCP01000078
280901
Bacillota
GTT
Asn
>WENV180233039
OBCP01000078
280903
Bacillota
>WENV180233045
OBCP01000080
118683
Bacillota
GTA
Tyr
>WENV180233061
OBCP01000102
56156
Bacillota
>WENV180233065
OBCP01000105
100513
Bacillota
CAG
Leu
>WENV180233066
OBCP01000105
13468
Bacillota
CGA
Ser
>WENV180233069
OBCP01000107
117890
Bacillota
GTA
Tyr
>WENV180233070
OBCP01000107
368693
Bacillota
TAC
Val
>WENV180233071
OBCP01000107
399260
Bacillota
TGT
Thr
>WENV180233072
OBCP01000107
117890
Bacillota
GTA
Tyr
>WENV180233073
OBCP01000107
399041
Bacillota
CCA
Trp
>WENV180233074
OBCP01000107
399041
Bacillota
CCA
Trp
>WENV180233094
OBCP01000116
176046
Bacillota
GTT
Asn
>WENV180233099
OBCP01000118
288974
Bacillota
CTT
Lys
>WENV180233106
OBCP01000125
145872
Bacillota
GTA
Tyr
>WENV180233108
OBCP01000125
398934
Bacillota
CCG
Arg
>WENV180233134
OBCP01000146
480520
Bacillota
TCC
Gly
>WENV180233135
OBCP01000146
176679
Bacillota
TCT
Arg
>WENV180233137
OBCP01000146
480520
Bacillota
TCC
Gly
>WENV180233138
OBCP01000146
176679
Bacillota
TCT
Arg
>WENV180233139
OBCP01000146
330433
Bacillota
GTG
His
>WENV180233140
OBCP01000146
399274
Bacillota
TTG
Gln
>WENV180233141
OBCP01000146
281299
Bacillota
TTT
Lys
>WENV180233153
OBCP01000151
281300
Bacillota
GAA
Phe
>WENV180233162
OBCP01000156
398936
Bacillota
CCT
Arg
>WENV180233167
OBCP01000163
400140
Bacillota
TTC
Glu
>WENV180233183
OBCP01000178
485753
Bacillota
GGT
Thr
>WENV180233185
OBCP01000182
20276
Bacillota
GCT
Ser
>WENV180233186
OBCP01000182
400839
Bacillota
ACG
Arg
>WENV180233187
OBCP01000182
46686
Bacillota
TAA
Leu
>WENV180233188
OBCP01000185
399058
Bacillota
CCT
Arg
>WENV180233218
OBCP01000215
179563
Bacillota
GAT
Ile
>WENV180233220
OBCP01000215
46658
Bacillota
AAG
Leu
>WENV180233234
OBCP01000231
137739
Bacillota
TAG
Leu
>WENV180233246
OBCP01000248
46658
Bacillota
AAG
Leu
>WENV180233255
OBCP01000263
20257
Bacillota
>WENV180233261
OBCP01000268
399269
Bacillota
CTC
Glu
>WENV180233306
OBCP01000319
399271
Bacillota
CCT
Arg
>WENV180233307
OBCP01000319
29462
Bacillota
GGA
Ser
>WENV180233392
OBCP01000458
179563
Bacillota
GAT
Ile
>WENV180233397
OBCP01000476
376566
Bacillota
GTG
His
>WENV180233402
OBCP01000479
487804
Bacillota
GGT
Thr
>WENV180233408
OBCP01000495
46686
Bacillota
TAA
Leu
>WENV180233409
OBCP01000495
307633
Bacillota
CAT
Met
>WENV180233419
OBCP01000532
281300
Bacillota
GAA
Phe
>WENV180233420
OBCP01000532
176678
Bacillota
GTC
Asp
>WENV180233421
OBCP01000532
399260
Bacillota
TGT
Thr
>WENV180233422
OBCP01000532
399261
Bacillota
>WENV180233451
OBCP01000570
399274
Bacillota
TTG
Gln
>WENV180233452
OBCP01000570
281299
Bacillota
TTT
Lys
>WENV180233453
OBCP01000570
117892
Bacillota
TAG
Leu
>WENV180233454
OBCP01000570
399275
Bacillota
GCC
Gly
>WENV180233455
OBCP01000570
480520
Bacillota
TCC
Gly
>WENV180233456
OBCP01000570
176681
Bacillota
TCG
Arg
>WENV180233471
OBCP01000634
53200
Bacillota
TAA
Leu
>WENV180233479
OBCP01000634
8724
Bacillota
GCT
Ser
>WENV180233480
OBCP01000634
400140
Bacillota
TTC
Glu
>WENV180233483
OBCP01000634
118683
Bacillota
GTA
Tyr
>WENV180233493
OBCP01000682
330433
Bacillota
GTG
His
>WENV180233494
OBCP01000682
399274
Bacillota
TTG
Gln
>WENV180233495
OBCP01000682
281299
Bacillota
TTT
Lys
>WENV180233520
OBCP01000776
20275
Bacillota
TGA
Ser
>WENV180233545
OBCP01001056
371336
Bacillota
GAA
Phe
>WENV180233550
OBCP01001139
380987
Bacillota
GTC
Asp
>WENV180233554
OBCP01001166
228403
Bacillota
CAT
Met
>WENV180233587
OBCP01001422
99059
Bacillota
CAA
Leu
>WENV180233589
OBCP01001530
47119
Bacillota
TAA
Leu
>WENV180233590
OBCP01001530
179130
Bacillota
ACG
Arg
>WENV180233609
OBCP01002106
398935
Bacillota
>WENV180233610
OBCP01002106
65075
Bacillota
TAA
Leu
>WENV180233622
OBCP01003367
176562
Bacillota
CAT
Met
>WENV180233623
OBCP01003367
280870
Bacillota
TGC
Ala
>WENV180233624
OBCP01003433
399261
Bacillota
>WENV180233625
OBCP01003433
368693
Bacillota
TAC
Val
>WENV180233626
OBCP01003433
176678
Bacillota
GTC
Asp
>WENV180233635
OBCP01004053
13236
Bacillota
GGA
Ser
>WENV180233638
OBCP01004757
281306
Bacillota
TGC
Ala
>WENV180233639
OBCP01004973
399260
Bacillota
TGT
Thr
>WENV180233640
OBCP01005437
145777
Bacillota
TAG
Leu
>WENV180233657
OBCP01007494
20275
Bacillota
TGA
Ser
>WENV180233658
OBCP01007509
20276
Bacillota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK