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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
294 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180334648
OBLF01028399
403686
Bacillota
>WENV180334028
OBLF01004023
102491
Bacillota
>WENV180333757
OBLF01002000
399266
Bacillota
>WENV180332851
OBLF01000013
178162
Bacillota
>WENV180334148
OBLF01005677
119281
Bacillota
>WENV180335175
OBLF01187246
399261
Bacillota
>WENV180334144
OBLF01005635
56690
Bacillota
AAG
Leu
>WENV180334019
OBLF01003961
46840
Bacillota
AAG
Leu
>WENV180334682
OBLF01033874
73638
Bacillota
AAG
Leu
>WENV180333331
OBLF01000547
58120
Bacillota
AAG
Leu
>WENV180333671
OBLF01001513
58120
Bacillota
AAG
Leu
>WENV180333712
OBLF01001712
58120
Bacillota
AAG
Leu
>WENV180333732
OBLF01001866
58120
Bacillota
AAG
Leu
>WENV180333761
OBLF01002026
58120
Bacillota
AAG
Leu
>WENV180334326
OBLF01008871
58120
Bacillota
AAG
Leu
>WENV180333808
OBLF01002178
399268
Bacillota
ACG
Arg
>WENV180334267
OBLF01007574
221826
Bacillota
ACG
Arg
>WENV180333295
OBLF01000485
179176
Bacillota
ACG
Arg
>WENV180334017
OBLF01003940
179176
Bacillota
ACG
Arg
>WENV180334088
OBLF01004668
179176
Bacillota
ACG
Arg
>WENV180334313
OBLF01008620
176769
Bacillota
ACG
Arg
>WENV180334422
OBLF01012375
175831
Bacillota
ACG
Arg
>WENV180333962
OBLF01003315
178962
Bacillota
ACG
Arg
>WENV180334761
OBLF01047735
178962
Bacillota
ACG
Arg
>WENV180334936
OBLF01093661
283739
Bacillota
AGT
Thr
>WENV180334331
OBLF01009084
73130
Bacillota
CAA
Leu
>WENV180334559
OBLF01019909
73624
Bacillota
CAA
Leu
>WENV180333863
OBLF01002586
175842
Bacillota
CAC
Val
>WENV180333939
OBLF01003100
175842
Bacillota
CAC
Val
>WENV180334495
OBLF01015836
175842
Bacillota
CAC
Val
>WENV180334484
OBLF01015051
74057
Bacillota
CAG
Leu
>WENV180333751
OBLF01001968
73009
Bacillota
CAG
Leu
>WENV180334584
OBLF01021660
73009
Bacillota
CAG
Leu
>WENV180335122
OBLF01176256
73009
Bacillota
CAG
Leu
>WENV180335227
OBLF01201743
73009
Bacillota
CAG
Leu
>WENV180333727
OBLF01001839
73009
Bacillota
CAG
Leu
>WENV180333701
OBLF01001688
74837
Bacillota
CAG
Leu
>WENV180333407
OBLF01000744
179917
Bacillota
CAT
Met
>WENV180333652
OBLF01001429
179917
Bacillota
CAT
Met
>WENV180334538
OBLF01018532
179917
Bacillota
CAT
Met
>WENV180335204
OBLF01190141
179917
Bacillota
CAT
Met
>WENV180333264
OBLF01000435
404079
Bacillota
CAT
Met
>WENV180333390
OBLF01000675
190476
Bacillota
CAT
Met
>WENV180333393
OBLF01000682
190476
Bacillota
CAT
Met
>WENV180333456
OBLF01000861
190476
Bacillota
CAT
Met
>WENV180334850
OBLF01069755
228403
Bacillota
CAT
Met
>WENV180333601
OBLF01001293
219372
Bacillota
CAT
Met
>WENV180333987
OBLF01003540
481239
Bacillota
CCC
Gly
>WENV180333941
OBLF01003109
291576
Bacillota
CCC
Gly
>WENV180334003
OBLF01003826
291576
Bacillota
CCC
Gly
>WENV180333406
OBLF01000732
482078
Bacillota
CCC
Gly
>WENV180333476
OBLF01000911
400041
Bacillota
CCG
Arg
>WENV180333184
OBLF01000295
179755
Bacillota
CCG
Arg
>WENV180333291
OBLF01000480
179755
Bacillota
CCG
Arg
>WENV180333979
OBLF01003428
179755
Bacillota
CCG
Arg
>WENV180334110
OBLF01004973
179755
Bacillota
CCG
Arg
>WENV180334332
OBLF01009111
179755
Bacillota
CCG
Arg
>WENV180334664
OBLF01030492
179755
Bacillota
CCG
Arg
>WENV180333892
OBLF01002792
400748
Bacillota
CCG
Arg
>WENV180334039
OBLF01004187
178115
Bacillota
CCT
Arg
>WENV180334302
OBLF01008208
180684
Bacillota
CCT
Arg
>WENV180334105
OBLF01004894
403917
Bacillota
CCT
Arg
>WENV180334079
OBLF01004619
183957
Bacillota
CCT
Arg
>WENV180334085
OBLF01004629
285563
Bacillota
CCT
Arg
>WENV180334157
OBLF01005800
13457
Bacillota
CGA
Ser
>WENV180333986
OBLF01003523
20941
Bacillota
CGA
Ser
>WENV180334509
OBLF01016816
20854
Bacillota
CGA
Ser
>WENV180333278
OBLF01000456
20570
Bacillota
CGA
Ser
>WENV180334361
OBLF01009713
284093
Bacillota
CGC
Ala
>WENV180333700
OBLF01001687
291581
Bacillota
CGG
Pro
>WENV180334581
OBLF01021477
179243
Bacillota
CGG
Pro
>WENV180333988
OBLF01003558
179845
Bacillota
CGG
Pro
>WENV180333963
OBLF01003315
228397
Bacillota
CGG
Pro
>WENV180334314
OBLF01008620
180702
Bacillota
CGG
Pro
>WENV180334962
OBLF01109626
283738
Bacillota
CGT
Thr
>WENV180334385
OBLF01010999
314710
Bacillota
CGT
Thr
>WENV180334807
OBLF01059843
416763
Bacillota
CTC
Glu
>WENV180333833
OBLF01002334
303871
Bacillota
CTC
Glu
>WENV180335211
OBLF01190955
403903
Bacillota
CTC
Glu
>WENV180333885
OBLF01002728
398854
Bacillota
CTC
Glu
>WENV180334401
OBLF01011348
398854
Bacillota
CTC
Glu
>WENV180333363
OBLF01000609
400841
Bacillota
CTC
Glu
>WENV180333834
OBLF01002334
284092
Bacillota
CTG
Gln
>WENV180333544
OBLF01001086
403916
Bacillota
CTG
Gln
>WENV180333492
OBLF01000939
480322
Bacillota
CTG
Gln
>WENV180333699
OBLF01001687
480322
Bacillota
CTG
Gln
>WENV180333852
OBLF01002483
480322
Bacillota
CTG
Gln
>WENV180334415
OBLF01011878
480322
Bacillota
CTG
Gln
>WENV180334793
OBLF01054355
480322
Bacillota
CTG
Gln
>WENV180333626
OBLF01001380
292444
Bacillota
CTT
Lys
>WENV180334233
OBLF01007061
292444
Bacillota
CTT
Lys
>WENV180334678
OBLF01033553
291558
Bacillota
CTT
Lys
>WENV180334256
OBLF01007271
332864
Bacillota
CTT
Lys
>WENV180333886
OBLF01002728
322848
Bacillota
CTT
Lys
>WENV180334343
OBLF01009441
322848
Bacillota
CTT
Lys
>WENV180335025
OBLF01136479
322848
Bacillota
CTT
Lys
>WENV180335174
OBLF01187233
322848
Bacillota
CTT
Lys
>WENV180333923
OBLF01003021
330413
Bacillota
CTT
Lys
>WENV180333459
OBLF01000862
280428
Bacillota
GAA
Phe
>WENV180334186
OBLF01006243
280428
Bacillota
GAA
Phe
>WENV180334765
OBLF01050343
280428
Bacillota
GAA
Phe
>WENV180335216
OBLF01191909
280428
Bacillota
GAA
Phe
>WENV180333341
OBLF01000553
291579
Bacillota
GAA
Phe
>WENV180334137
OBLF01005442
291579
Bacillota
GAA
Phe
>WENV180334309
OBLF01008402
291579
Bacillota
GAA
Phe
>WENV180334365
OBLF01009928
291579
Bacillota
GAA
Phe
>WENV180334539
OBLF01018532
291579
Bacillota
GAA
Phe
>WENV180334900
OBLF01083396
291579
Bacillota
GAA
Phe
>WENV180335189
OBLF01188414
291579
Bacillota
GAA
Phe
>WENV180335205
OBLF01190141
291579
Bacillota
GAA
Phe
>WENV180334445
OBLF01013485
284627
Bacillota
GAA
Phe
>WENV180333682
OBLF01001573
291634
Bacillota
GAA
Phe
>WENV180334084
OBLF01004625
291634
Bacillota
GAA
Phe
>WENV180333292
OBLF01000484
281300
Bacillota
GAA
Phe
>WENV180333298
OBLF01000492
281300
Bacillota
GAA
Phe
>WENV180333091
OBLF01000199
320075
Bacillota
GAA
Phe
>WENV180334046
OBLF01004291
280483
Bacillota
GAA
Phe
>WENV180333534
OBLF01001074
280447
Bacillota
GAC
Val
>WENV180334289
OBLF01007942
280447
Bacillota
GAC
Val
>WENV180334440
OBLF01013407
280447
Bacillota
GAC
Val
>WENV180335097
OBLF01168991
189473
Bacillota
GAT
Ile
>WENV180334098
OBLF01004842
405363
Bacillota
GCA
Cys
>WENV180334240
OBLF01007134
405363
Bacillota
GCA
Cys
>WENV180333197
OBLF01000325
481217
Bacillota
GCA
Cys
>WENV180333417
OBLF01000762
481217
Bacillota
GCA
Cys
>WENV180333547
OBLF01001095
481217
Bacillota
GCA
Cys
>WENV180333991
OBLF01003600
481217
Bacillota
GCA
Cys
>WENV180334244
OBLF01007238
481217
Bacillota
GCA
Cys
>WENV180333293
OBLF01000484
399272
Bacillota
GCA
Cys
>WENV180334611
OBLF01024173
399272
Bacillota
GCA
Cys
>WENV180334558
OBLF01019909
481152
Bacillota
GCA
Cys
>WENV180333683
OBLF01001573
404076
Bacillota
GCC
Gly
>WENV180334275
OBLF01007638
404076
Bacillota
GCC
Gly
>WENV180334871
OBLF01074637
404076
Bacillota
GCC
Gly
>WENV180333268
OBLF01000440
404076
Bacillota
GCC
Gly
>WENV180333630
OBLF01001380
400719
Bacillota
GCC
Gly
>WENV180332945
OBLF01000047
285756
Bacillota
GCC
Gly
>WENV180334047
OBLF01004291
285756
Bacillota
GCC
Gly
>WENV180334118
OBLF01005173
405393
Bacillota
GCC
Gly
>WENV180333805
OBLF01002178
20274
Bacillota
GCT
Ser
>WENV180333807
OBLF01002178
20274
Bacillota
GCT
Ser
>WENV180333440
OBLF01000817
5692
Bacillota
GCT
Ser
>WENV180333565
OBLF01001132
5692
Bacillota
GCT
Ser
>WENV180333303
OBLF01000498
21311
Bacillota
GCT
Ser
>WENV180334133
OBLF01005391
29462
Bacillota
GGA
Ser
>WENV180335114
OBLF01173748
4025
Bacillota
GGA
Ser
>WENV180335155
OBLF01183779
4742
Bacillota
GGA
Ser
>WENV180333130
OBLF01000239
184497
Bacillota
GGG
Pro
>WENV180333191
OBLF01000313
184497
Bacillota
GGG
Pro
>WENV180333940
OBLF01003105
184497
Bacillota
GGG
Pro
>WENV180334337
OBLF01009258
184497
Bacillota
GGG
Pro
>WENV180334381
OBLF01010639
184497
Bacillota
GGG
Pro
>WENV180334607
OBLF01023672
184497
Bacillota
GGG
Pro
>WENV180333294
OBLF01000484
289738
Bacillota
GGT
Thr
>WENV180334976
OBLF01114318
288953
Bacillota
GGT
Thr
>WENV180333543
OBLF01001085
280444
Bacillota
GGT
Thr
>WENV180333556
OBLF01001111
280444
Bacillota
GGT
Thr
>WENV180333557
OBLF01001111
280444
Bacillota
GGT
Thr
>WENV180333539
OBLF01001085
280444
Bacillota
GGT
Thr
>WENV180334194
OBLF01006404
289123
Bacillota
GGT
Thr
>WENV180334451
OBLF01013654
197293
Bacillota
GGT
Thr
>WENV180334743
OBLF01044784
118683
Bacillota
GTA
Tyr
>WENV180333467
OBLF01000876
99852
Bacillota
GTA
Tyr
>WENV180334099
OBLF01004842
99852
Bacillota
GTA
Tyr
>WENV180333535
OBLF01001077
141173
Bacillota
GTA
Tyr
>WENV180334268
OBLF01007617
141173
Bacillota
GTA
Tyr
>WENV180333974
OBLF01003406
100473
Bacillota
GTA
Tyr
>WENV180334076
OBLF01004579
105208
Bacillota
GTA
Tyr
>WENV180333681
OBLF01001573
184504
Bacillota
GTC
Asp
>WENV180334274
OBLF01007638
184504
Bacillota
GTC
Asp
>WENV180334270
OBLF01007617
176678
Bacillota
GTC
Asp
>WENV180333881
OBLF01002722
180700
Bacillota
GTC
Asp
>WENV180334577
OBLF01020921
180700
Bacillota
GTC
Asp
>WENV180334083
OBLF01004625
186123
Bacillota
GTC
Asp
>WENV180334126
OBLF01005259
179245
Bacillota
GTC
Asp
>WENV180334779
OBLF01052212
180688
Bacillota
GTC
Asp
>WENV180333381
OBLF01000653
175899
Bacillota
GTC
Asp
>WENV180335260
OBLF01217046
175915
Bacillota
GTC
Asp
>WENV180333542
OBLF01001085
175849
Bacillota
GTC
Asp
>WENV180333555
OBLF01001111
175849
Bacillota
GTC
Asp
>WENV180335118
OBLF01175123
175849
Bacillota
GTC
Asp
>WENV180333637
OBLF01001380
281302
Bacillota
GTG
His
>WENV180333424
OBLF01000773
175857
Bacillota
GTG
His
>WENV180334557
OBLF01019909
156219
Bacillota
GTG
His
>WENV180335113
OBLF01173748
283494
Bacillota
GTT
Asn
>WENV180334961
OBLF01109626
285564
Bacillota
GTT
Asn
>WENV180333269
OBLF01000442
175868
Bacillota
GTT
Asn
>WENV180334402
OBLF01011348
175868
Bacillota
GTT
Asn
>WENV180333756
OBLF01002000
46686
Bacillota
TAA
Leu
>WENV180335185
OBLF01188016
46686
Bacillota
TAA
Leu
>WENV180334387
OBLF01011009
46835
Bacillota
TAA
Leu
>WENV180334474
OBLF01014319
46835
Bacillota
TAA
Leu
>WENV180334537
OBLF01018521
46835
Bacillota
TAA
Leu
>WENV180334602
OBLF01023241
46835
Bacillota
TAA
Leu
>WENV180334865
OBLF01072273
46835
Bacillota
TAA
Leu
>WENV180334951
OBLF01103566
46835
Bacillota
TAA
Leu
>WENV180332798
OBLF01000001
290391
Bacillota
TAC
Val
>WENV180333849
OBLF01002455
290391
Bacillota
TAC
Val
>WENV180334461
OBLF01013941
290391
Bacillota
TAC
Val
>WENV180334647
OBLF01028360
290391
Bacillota
TAC
Val
>WENV180333202
OBLF01000332
280466
Bacillota
TAC
Val
>WENV180335117
OBLF01175123
280466
Bacillota
TAC
Val
>WENV180334756
OBLF01047735
292368
Bacillota
TAC
Val
>WENV180333382
OBLF01000653
284723
Bacillota
TAC
Val
>WENV180333871
OBLF01002642
284723
Bacillota
TAC
Val
>WENV180334864
OBLF01072273
284723
Bacillota
TAC
Val
>WENV180335074
OBLF01162696
284723
Bacillota
TAC
Val
>WENV180333022
OBLF01000118
284723
Bacillota
TAC
Val
>WENV180333036
OBLF01000152
284723
Bacillota
TAC
Val
>WENV180334259
OBLF01007330
294020
Bacillota
TAC
Val
>WENV180334473
OBLF01014319
294020
Bacillota
TAC
Val
>WENV180334536
OBLF01018521
294020
Bacillota
TAC
Val
>WENV180334896
OBLF01083396
294020
Bacillota
TAC
Val
>WENV180334119
OBLF01005185
282730
Bacillota
TAC
Val
>WENV180334269
OBLF01007617
335164
Bacillota
TAC
Val
>WENV180333186
OBLF01000300
321248
Bacillota
TAC
Val
>WENV180334266
OBLF01007574
321248
Bacillota
TAC
Val
>WENV180333795
OBLF01002117
127376
Bacillota
TAG
Leu
>WENV180333629
OBLF01001380
119388
Bacillota
TAG
Leu
>WENV180334120
OBLF01005185
100474
Bacillota
TAG
Leu
>WENV180333631
OBLF01001380
480520
Bacillota
TCC
Gly
>WENV180333634
OBLF01001380
480520
Bacillota
TCC
Gly
>WENV180333635
OBLF01001380
480520
Bacillota
TCC
Gly
>WENV180335172
OBLF01187148
480520
Bacillota
TCC
Gly
>WENV180333632
OBLF01001380
184235
Bacillota
TCG
Arg
>WENV180333633
OBLF01001380
176679
Bacillota
TCT
Arg
>WENV180333636
OBLF01001380
176679
Bacillota
TCT
Arg
>WENV180335173
OBLF01187148
176679
Bacillota
TCT
Arg
>WENV180334989
OBLF01120989
179242
Bacillota
TCT
Arg
>WENV180333762
OBLF01002035
175859
Bacillota
TCT
Arg
>WENV180333911
OBLF01002956
175859
Bacillota
TCT
Arg
>WENV180333947
OBLF01003227
175859
Bacillota
TCT
Arg
>WENV180333444
OBLF01000827
175859
Bacillota
TCT
Arg
>WENV180334852
OBLF01070587
179810
Bacillota
TCT
Arg
>WENV180334175
OBLF01006102
180701
Bacillota
TCT
Arg
>WENV180334235
OBLF01007063
178717
Bacillota
TCT
Arg
>WENV180333709
OBLF01001705
184539
Bacillota
TCT
Arg
>WENV180334993
OBLF01122206
179166
Bacillota
TCT
Arg
>WENV180333806
OBLF01002178
20238
Bacillota
TGA
Ser
>WENV180334273
OBLF01007629
20238
Bacillota
TGA
Ser
>WENV180333439
OBLF01000817
56074
Bacillota
TGA
Ser
>WENV180333564
OBLF01001132
56074
Bacillota
TGA
Ser
>WENV180333908
OBLF01002937
280870
Bacillota
TGC
Ala
>WENV180334737
OBLF01044408
280500
Bacillota
TGC
Ala
>WENV180334658
OBLF01029397
295166
Bacillota
TGC
Ala
>WENV180334671
OBLF01032641
295166
Bacillota
TGC
Ala
>WENV180334821
OBLF01063065
291597
Bacillota
TGC
Ala
>WENV180334885
OBLF01078098
291597
Bacillota
TGC
Ala
>WENV180334496
OBLF01015941
280486
Bacillota
TGC
Ala
>WENV180334762
OBLF01047735
187706
Bacillota
TGG
Pro
>WENV180333297
OBLF01000492
320500
Bacillota
TGG
Pro
>WENV180333690
OBLF01001621
320500
Bacillota
TGG
Pro
>WENV180334930
OBLF01090758
328987
Bacillota
TGG
Pro
>WENV180333910
OBLF01002947
280473
Bacillota
TGG
Pro
>WENV180334009
OBLF01003890
280473
Bacillota
TGG
Pro
>WENV180334758
OBLF01047735
281413
Bacillota
TGT
Thr
>WENV180333559
OBLF01001118
303718
Bacillota
TGT
Thr
>WENV180334691
OBLF01034830
303718
Bacillota
TGT
Thr
>WENV180335218
OBLF01193595
399260
Bacillota
TGT
Thr
>WENV180335078
OBLF01163661
283742
Bacillota
TGT
Thr
>WENV180333404
OBLF01000725
398833
Bacillota
TGT
Thr
>WENV180333920
OBLF01003011
398833
Bacillota
TGT
Thr
>WENV180334635
OBLF01027488
398833
Bacillota
TGT
Thr
>WENV180335214
OBLF01191047
433989
Bacillota
TTC
Glu
>WENV180334431
OBLF01012917
421660
Bacillota
TTC
Glu
>WENV180334575
OBLF01020921
421660
Bacillota
TTC
Glu
>WENV180333149
OBLF01000264
398857
Bacillota
TTC
Glu
>WENV180333470
OBLF01000883
398857
Bacillota
TTC
Glu
>WENV180333582
OBLF01001207
398857
Bacillota
TTC
Glu
>WENV180334469
OBLF01014319
398857
Bacillota
TTC
Glu
>WENV180333394
OBLF01000682
398832
Bacillota
TTC
Glu
>WENV180333457
OBLF01000861
398832
Bacillota
TTC
Glu
>WENV180333391
OBLF01000675
398832
Bacillota
TTC
Glu
>WENV180334077
OBLF01004579
404087
Bacillota
TTG
Gln
>WENV180333425
OBLF01000773
401685
Bacillota
TTG
Gln
>WENV180334025
OBLF01004018
480324
Bacillota
TTG
Gln
>WENV180334310
OBLF01008420
480324
Bacillota
TTG
Gln
>WENV180333975
OBLF01003406
400600
Bacillota
TTG
Gln
>WENV180333627
OBLF01001380
399264
Bacillota
TTG
Gln
>WENV180333638
OBLF01001380
399264
Bacillota
TTG
Gln
>WENV180333628
OBLF01001380
281299
Bacillota
TTT
Lys
>WENV180333639
OBLF01001380
281299
Bacillota
TTT
Lys
>WENV180334234
OBLF01007061
281299
Bacillota
TTT
Lys
>WENV180335077
OBLF01163661
283803
Bacillota
TTT
Lys
>WENV180334757
OBLF01047735
334757
Bacillota
TTT
Lys
>WENV180333307
OBLF01000502
280476
Bacillota
TTT
Lys
>WENV180333650
OBLF01001405
280476
Bacillota
TTT
Lys
>WENV180334038
OBLF01004170
280476
Bacillota
TTT
Lys
>WENV180334141
OBLF01005565
280476
Bacillota
TTT
Lys
>WENV180334177
OBLF01006113
280476
Bacillota
TTT
Lys
>WENV180334568
OBLF01020692
280476
Bacillota
TTT
Lys
>WENV180333426
OBLF01000773
309916
Bacillota
TTT
Lys
>WENV180333689
OBLF01001616
309916
Bacillota
TTT
Lys
>WENV180334540
OBLF01018532
309916
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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