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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180401922
OBRN01012359
147639
Bacillota
ACG
Arg
>WENV180402037
OBRN01044918
199192
Bacillota
ACG
Arg
>WENV180402058
OBRN01059534
58712
Bacillota
CAG
Leu
>WENV180401987
OBRN01027950
60249
Bacillota
CAG
Leu
>WENV180402070
OBRN01070367
340081
Bacillota
CCG
Arg
>WENV180401909
OBRN01010124
340080
Bacillota
CCT
Arg
>WENV180401988
OBRN01027950
10926
Bacillota
CGA
Ser
>WENV180401923
OBRN01012911
161950
Bacillota
CGG
Pro
>WENV180401819
OBRN01002641
238746
Bacillota
CGT
Thr
>WENV180402068
OBRN01066259
338147
Bacillota
CTC
Glu
>WENV180401913
OBRN01011309
313331
Bacillota
CTC
Glu
>WENV180401785
OBRN01001319
344183
Bacillota
CTG
Gln
>WENV180402004
OBRN01033832
302152
Bacillota
CTT
Lys
>WENV180401837
OBRN01003797
238745
Bacillota
CTT
Lys
>WENV180402081
OBRN01071045
237889
Bacillota
CTT
Lys
>WENV180401925
OBRN01013160
250349
Bacillota
GAA
Phe
>WENV180402078
OBRN01070835
173314
Bacillota
GAT
Ile
>WENV180401926
OBRN01013160
368876
Bacillota
GCC
Gly
>WENV180401977
OBRN01023425
16834
Bacillota
GCT
Ser
>WENV180402030
OBRN01042984
315448
Bacillota
GGT
Thr
>WENV180402062
OBRN01062136
152237
Bacillota
GTC
Asp
>WENV180401916
OBRN01012359
316443
Bacillota
GTC
Asp
>WENV180401924
OBRN01013160
235197
Bacillota
GTC
Asp
>WENV180402027
OBRN01042479
243613
Bacillota
GTG
His
>WENV180401955
OBRN01018987
237957
Bacillota
GTT
Asn
>WENV180401927
OBRN01013160
296878
Bacillota
GTT
Asn
>WENV180401921
OBRN01012359
37247
Bacillota
TAA
Leu
>WENV180401929
OBRN01013160
243612
Bacillota
TAC
Val
>WENV180401918
OBRN01012359
109476
Bacillota
TAG
Leu
>WENV180401928
OBRN01013160
391536
Bacillota
TTC
Glu
>WENV180401956
OBRN01018987
390525
Bacillota
TTC
Glu
>WENV180402049
OBRN01050242
339803
Bacillota
TTG
Gln
>WENV180402028
OBRN01042479
343027
Bacillota
TTG
Gln
>WENV180402073
OBRN01070695
239020
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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