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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
169 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180450629
OBXI01000035
148239
Bacillota
TCT
Arg
>WENV180450630
OBXI01000035
144610
Bacillota
GTG
His
>WENV180450633
OBXI01000035
114075
Bacillota
TAG
Leu
>WENV180450655
OBXI01000057
44854
Bacillota
TGA
Ser
>WENV180450656
OBXI01000057
4624
Bacillota
GCT
Ser
>WENV180450690
OBXI01000104
235154
Bacillota
GTT
Asn
>WENV180450707
OBXI01000126
245296
Bacillota
CCC
Gly
>WENV180450726
OBXI01000156
256380
Bacillota
>WENV180450752
OBXI01000185
80612
Bacillota
GTA
Tyr
>WENV180450763
OBXI01000197
267556
Bacillota
TAC
Val
>WENV180450764
OBXI01000197
155089
Bacillota
CAT
Met
>WENV180450780
OBXI01000226
59312
Bacillota
CAG
Leu
>WENV180450787
OBXI01000231
235079
Bacillota
GAA
Phe
>WENV180450785
OBXI01000231
144621
Bacillota
GTT
Asn
>WENV180450788
OBXI01000231
249259
Bacillota
GCC
Gly
>WENV180450789
OBXI01000235
338149
Bacillota
CTC
Glu
>WENV180450790
OBXI01000235
144621
Bacillota
GTT
Asn
>WENV180450839
OBXI01000342
100326
Bacillota
GTA
Tyr
>WENV180450842
OBXI01000344
238974
Bacillota
GAA
Phe
>WENV180450847
OBXI01000352
182792
Bacillota
GTC
Asp
>WENV180450848
OBXI01000352
235079
Bacillota
GAA
Phe
>WENV180450849
OBXI01000352
249259
Bacillota
GCC
Gly
>WENV180450859
OBXI01000388
152492
Bacillota
GGG
Pro
>WENV180450863
OBXI01000408
272488
Bacillota
GAA
Phe
>WENV180450883
OBXI01000449
414486
Bacillota
CCC
Gly
>WENV180450886
OBXI01000461
235124
Bacillota
TGG
Pro
>WENV180450893
OBXI01000471
144583
Bacillota
ACG
Arg
>WENV180450912
OBXI01000533
411547
Bacillota
CTG
Gln
>WENV180450919
OBXI01000561
235098
Bacillota
GAC
Val
>WENV180450947
OBXI01000723
235124
Bacillota
TGG
Pro
>WENV180450959
OBXI01000760
144621
Bacillota
GTT
Asn
>WENV180450988
OBXI01000845
238945
Bacillota
GCC
Gly
>WENV180450990
OBXI01000857
235098
Bacillota
GAC
Val
>WENV180450992
OBXI01000858
235114
Bacillota
TTT
Lys
>WENV180450994
OBXI01000873
182792
Bacillota
GTC
Asp
>WENV180450995
OBXI01000873
235095
Bacillota
GGT
Thr
>WENV180450993
OBXI01000873
235171
Bacillota
CCA
Trp
>WENV180450997
OBXI01000878
44854
Bacillota
TGA
Ser
>WENV180450998
OBXI01000878
4624
Bacillota
GCT
Ser
>WENV180451011
OBXI01000993
235098
Bacillota
GAC
Val
>WENV180451012
OBXI01001013
11034
Bacillota
GGA
Ser
>WENV180451014
OBXI01001021
338147
Bacillota
CTC
Glu
>WENV180451022
OBXI01001074
272992
Bacillota
CTT
Lys
>WENV180451031
OBXI01001125
162445
Bacillota
CAT
Met
>WENV180451029
OBXI01001125
162445
Bacillota
CAT
Met
>WENV180451032
OBXI01001142
58712
Bacillota
CAG
Leu
>WENV180451043
OBXI01001207
58712
Bacillota
CAG
Leu
>WENV180451068
OBXI01001376
144612
Bacillota
TCT
Arg
>WENV180451081
OBXI01001435
272488
Bacillota
GAA
Phe
>WENV180451083
OBXI01001455
235095
Bacillota
GGT
Thr
>WENV180451100
OBXI01001630
148188
Bacillota
CCG
Arg
>WENV180451107
OBXI01001689
58712
Bacillota
CAG
Leu
>WENV180451112
OBXI01001695
37437
Bacillota
TAA
Leu
>WENV180451109
OBXI01001695
250349
Bacillota
GAA
Phe
>WENV180451108
OBXI01001695
235197
Bacillota
GTC
Asp
>WENV180451110
OBXI01001695
368876
Bacillota
GCC
Gly
>WENV180451120
OBXI01001788
245298
Bacillota
CGG
Pro
>WENV180451119
OBXI01001788
411547
Bacillota
CTG
Gln
>WENV180451128
OBXI01001839
245298
Bacillota
CGG
Pro
>WENV180451127
OBXI01001839
411547
Bacillota
CTG
Gln
>WENV180451126
OBXI01001839
411549
Bacillota
TTG
Gln
>WENV180451132
OBXI01001897
338149
Bacillota
CTC
Glu
>WENV180451133
OBXI01001897
144621
Bacillota
GTT
Asn
>WENV180451139
OBXI01001906
182792
Bacillota
GTC
Asp
>WENV180451140
OBXI01001906
235095
Bacillota
GGT
Thr
>WENV180451138
OBXI01001906
235095
Bacillota
GGT
Thr
>WENV180451137
OBXI01001906
235171
Bacillota
CCA
Trp
>WENV180451141
OBXI01001910
411547
Bacillota
CTG
Gln
>WENV180451164
OBXI01002212
16842
Bacillota
CGA
Ser
>WENV180451165
OBXI01002222
58712
Bacillota
CAG
Leu
>WENV180451172
OBXI01002356
235095
Bacillota
GGT
Thr
>WENV180451177
OBXI01002361
340802
Bacillota
TTG
Gln
>WENV180451176
OBXI01002361
144610
Bacillota
GTG
His
>WENV180451175
OBXI01002361
157635
Bacillota
TCT
Arg
>WENV180451180
OBXI01002375
18852
Bacillota
GCT
Ser
>WENV180451181
OBXI01002383
245298
Bacillota
CGG
Pro
>WENV180451190
OBXI01002543
147684
Bacillota
ACG
Arg
>WENV180451193
OBXI01002555
44859
Bacillota
AAG
Leu
>WENV180451198
OBXI01002672
235117
Bacillota
TAC
Val
>WENV180451197
OBXI01002672
249259
Bacillota
GCC
Gly
>WENV180451202
OBXI01002698
338129
Bacillota
TGT
Thr
>WENV180451207
OBXI01002739
80612
Bacillota
GTA
Tyr
>WENV180451226
OBXI01002989
235098
Bacillota
GAC
Val
>WENV180451250
OBXI01003356
238945
Bacillota
GCC
Gly
>WENV180451248
OBXI01003356
238945
Bacillota
GCC
Gly
>WENV180451254
OBXI01003385
338152
Bacillota
TTC
Glu
>WENV180451260
OBXI01003432
11034
Bacillota
GGA
Ser
>WENV180451263
OBXI01003468
144583
Bacillota
ACG
Arg
>WENV180451269
OBXI01003486
235127
Bacillota
TTT
Lys
>WENV180451266
OBXI01003486
147674
Bacillota
TCT
Arg
>WENV180451273
OBXI01003582
412387
Bacillota
GCA
Cys
>WENV180451290
OBXI01004002
235701
Bacillota
TTT
Lys
>WENV180451288
OBXI01004002
243613
Bacillota
GTG
His
>WENV180451289
OBXI01004002
343027
Bacillota
TTG
Gln
>WENV180451300
OBXI01004208
250349
Bacillota
GAA
Phe
>WENV180451299
OBXI01004208
235197
Bacillota
GTC
Asp
>WENV180451308
OBXI01004285
243647
Bacillota
TTT
Lys
>WENV180451307
OBXI01004285
243646
Bacillota
GTT
Asn
>WENV180451310
OBXI01004285
243612
Bacillota
TAC
Val
>WENV180451311
OBXI01004285
368876
Bacillota
GCC
Gly
>WENV180451306
OBXI01004285
368876
Bacillota
GCC
Gly
>WENV180451331
OBXI01004825
238945
Bacillota
GCC
Gly
>WENV180451332
OBXI01004895
182792
Bacillota
GTC
Asp
>WENV180451333
OBXI01004895
249259
Bacillota
GCC
Gly
>WENV180451335
OBXI01004938
148188
Bacillota
CCG
Arg
>WENV180451340
OBXI01005460
16834
Bacillota
GCT
Ser
>WENV180451345
OBXI01005866
250349
Bacillota
GAA
Phe
>WENV180451350
OBXI01005920
411549
Bacillota
TTG
Gln
>WENV180451356
OBXI01006000
273862
Bacillota
TGC
Ala
>WENV180451365
OBXI01006411
235095
Bacillota
GGT
Thr
>WENV180451363
OBXI01006411
235171
Bacillota
CCA
Trp
>WENV180451366
OBXI01006447
235127
Bacillota
TTT
Lys
>WENV180451373
OBXI01006567
155958
Bacillota
GAT
Ile
>WENV180451387
OBXI01007157
411547
Bacillota
CTG
Gln
>WENV180451395
OBXI01007725
342895
Bacillota
CAT
Met
>WENV180451401
OBXI01008756
338129
Bacillota
TGT
Thr
>WENV180451419
OBXI01009583
247734
Bacillota
TGC
Ala
>WENV180451426
OBXI01010026
149125
Bacillota
TCT
Arg
>WENV180451436
OBXI01010711
341763
Bacillota
CTC
Glu
>WENV180451444
OBXI01011468
338129
Bacillota
TGT
Thr
>WENV180451451
OBXI01011776
144594
Bacillota
CAC
Val
>WENV180451481
OBXI01014741
246023
Bacillota
TGC
Ala
>WENV180451483
OBXI01014973
235150
Bacillota
TGC
Ala
>WENV180451492
OBXI01015510
152491
Bacillota
CAT
Met
>WENV180451488
OBXI01015510
273029
Bacillota
TGT
Thr
>WENV180451491
OBXI01015510
281472
Bacillota
GGT
Thr
>WENV180451520
OBXI01017607
238945
Bacillota
GCC
Gly
>WENV180451533
OBXI01019912
114002
Bacillota
CAA
Leu
>WENV180451540
OBXI01020742
340802
Bacillota
TTG
Gln
>WENV180451543
OBXI01020965
144652
Bacillota
GTC
Asp
>WENV180451560
OBXI01022388
28968
Bacillota
GGA
Ser
>WENV180451584
OBXI01029886
338152
Bacillota
TTC
Glu
>WENV180451587
OBXI01031238
413657
Bacillota
CCC
Gly
>WENV180451589
OBXI01031305
338128
Bacillota
TTC
Glu
>WENV180451605
OBXI01035785
338149
Bacillota
CTC
Glu
>WENV180451612
OBXI01038767
238945
Bacillota
GCC
Gly
>WENV180451613
OBXI01039543
149041
Bacillota
GTC
Asp
>WENV180451615
OBXI01039543
239832
Bacillota
TGT
Thr
>WENV180451620
OBXI01039635
356488
Bacillota
TGT
Thr
>WENV180451616
OBXI01039635
411584
Bacillota
TCC
Gly
>WENV180451619
OBXI01039635
235289
Bacillota
GTT
Asn
>WENV180451625
OBXI01040232
144672
Bacillota
TCT
Arg
>WENV180451639
OBXI01045075
147135
Bacillota
ACG
Arg
>WENV180451653
OBXI01046785
267556
Bacillota
TAC
Val
>WENV180451652
OBXI01046785
144599
Bacillota
GTC
Asp
>WENV180451664
OBXI01050008
235137
Bacillota
TGC
Ala
>WENV180451665
OBXI01050272
274189
Bacillota
TGT
Thr
>WENV180451679
OBXI01052943
235287
Bacillota
TTT
Lys
>WENV180451678
OBXI01052943
235290
Bacillota
TTG
Gln
>WENV180451677
OBXI01052943
144762
Bacillota
TCT
Arg
>WENV180451683
OBXI01055829
239832
Bacillota
TGT
Thr
>WENV180451702
OBXI01060820
249259
Bacillota
GCC
Gly
>WENV180451714
OBXI01069273
411585
Bacillota
GCA
Cys
>WENV180451713
OBXI01069273
144767
Bacillota
GTG
His
>WENV180451718
OBXI01071253
235134
Bacillota
GAA
Phe
>WENV180451719
OBXI01071253
240017
Bacillota
GCC
Gly
>WENV180451721
OBXI01072436
235079
Bacillota
GAA
Phe
>WENV180451722
OBXI01072436
249259
Bacillota
GCC
Gly
>WENV180451724
OBXI01073079
144668
Bacillota
GTC
Asp
>WENV180451738
OBXI01087904
279635
Bacillota
GTG
His
>WENV180451750
OBXI01095296
235294
Bacillota
TGC
Ala
>WENV180451754
OBXI01098303
243646
Bacillota
GTT
Asn
>WENV180451755
OBXI01098322
235117
Bacillota
TAC
Val
>WENV180451756
OBXI01098377
182792
Bacillota
GTC
Asp
>WENV180451760
OBXI01098554
95563
Bacillota
GTA
Tyr
>WENV180451762
OBXI01098867
235113
Bacillota
GAA
Phe
>WENV180451764
OBXI01099725
58712
Bacillota
CAG
Leu
>WENV180451769
OBXI01100000
338147
Bacillota
CTC
Glu
>WENV180451780
OBXI01100193
144621
Bacillota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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