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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180465114
OBYE01001278
243647
Bacillota
TTT
Lys
>WENV180465119
OBYE01001278
243647
Bacillota
TTT
Lys
>WENV180465092
OBYE01000584
235507
Bacillota
GAA
Phe
>WENV180465091
OBYE01000557
16842
Bacillota
CGA
Ser
>WENV180465155
OBYE01006171
235693
Bacillota
GGT
Thr
>WENV180465148
OBYE01005518
147691
Bacillota
GAT
Ile
>WENV180465171
OBYE01008579
113680
Bacillota
TAG
Leu
>WENV180465109
OBYE01001050
235137
Bacillota
TGC
Ala
>WENV180465174
OBYE01012212
412107
Bacillota
TCC
Gly
>WENV180465164
OBYE01007433
145606
Bacillota
GTC
Asp
>WENV180465105
OBYE01000770
16834
Bacillota
GCT
Ser
>WENV180465118
OBYE01001278
243646
Bacillota
GTT
Asn
>WENV180465113
OBYE01001278
243646
Bacillota
GTT
Asn
>WENV180465116
OBYE01001278
243612
Bacillota
TAC
Val
>WENV180465169
OBYE01007740
339364
Bacillota
TTG
Gln
>WENV180465173
OBYE01012212
339363
Bacillota
GCC
Gly
>WENV180465151
OBYE01006141
235197
Bacillota
GTC
Asp
>WENV180465168
OBYE01007740
237287
Bacillota
GTG
His
>WENV180465166
OBYE01007433
237284
Bacillota
TAC
Val
>WENV180465167
OBYE01007740
145469
Bacillota
TCT
Arg
>WENV180465156
OBYE01006171
152491
Bacillota
CAT
Met
>WENV180465165
OBYE01007433
338545
Bacillota
>WENV180465170
OBYE01008579
237283
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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