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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
158 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180481966
OBZG01000003
340802
Bacillota
TTG
Gln
>WENV180481994
OBZG01000014
267649
Bacillota
TAC
Val
>WENV180481992
OBZG01000014
267649
Bacillota
TAC
Val
>WENV180482051
OBZG01000040
23769
Bacillota
TAA
Leu
>WENV180482066
OBZG01000049
23769
Bacillota
TAA
Leu
>WENV180482064
OBZG01000049
147684
Bacillota
ACG
Arg
>WENV180482062
OBZG01000049
419877
Bacillota
TCC
Gly
>WENV180482073
OBZG01000053
340080
Bacillota
CCT
Arg
>WENV180482109
OBZG01000081
340081
Bacillota
CCG
Arg
>WENV180482107
OBZG01000081
238747
Bacillota
GTG
His
>WENV180482123
OBZG01000084
339890
Bacillota
TTG
Gln
>WENV180482132
OBZG01000086
267649
Bacillota
TAC
Val
>WENV180482133
OBZG01000086
155089
Bacillota
CAT
Met
>WENV180482147
OBZG01000098
287000
Bacillota
GTT
Asn
>WENV180482146
OBZG01000098
412387
Bacillota
GCA
Cys
>WENV180482177
OBZG01000127
238745
Bacillota
CTT
Lys
>WENV180482230
OBZG01000185
267556
Bacillota
TAC
Val
>WENV180482229
OBZG01000185
144668
Bacillota
GTC
Asp
>WENV180482242
OBZG01000192
182792
Bacillota
GTC
Asp
>WENV180482241
OBZG01000192
235117
Bacillota
TAC
Val
>WENV180482243
OBZG01000192
235079
Bacillota
GAA
Phe
>WENV180482244
OBZG01000192
249259
Bacillota
GCC
Gly
>WENV180482240
OBZG01000192
249259
Bacillota
GCC
Gly
>WENV180482253
OBZG01000208
59312
Bacillota
CAG
Leu
>WENV180482257
OBZG01000224
338131
Bacillota
GCC
Gly
>WENV180482268
OBZG01000253
144672
Bacillota
TCT
Arg
>WENV180482278
OBZG01000271
23769
Bacillota
TAA
Leu
>WENV180482277
OBZG01000271
144668
Bacillota
GTC
Asp
>WENV180482282
OBZG01000277
267556
Bacillota
TAC
Val
>WENV180482280
OBZG01000277
267556
Bacillota
TAC
Val
>WENV180482286
OBZG01000282
235127
Bacillota
TTT
Lys
>WENV180482299
OBZG01000301
235127
Bacillota
TTT
Lys
>WENV180482305
OBZG01000306
238945
Bacillota
GCC
Gly
>WENV180482320
OBZG01000346
152492
Bacillota
GGG
Pro
>WENV180482330
OBZG01000350
338143
Bacillota
CTC
Glu
>WENV180482329
OBZG01000350
338143
Bacillota
CTC
Glu
>WENV180482335
OBZG01000362
338152
Bacillota
TTC
Glu
>WENV180482334
OBZG01000362
287000
Bacillota
GTT
Asn
>WENV180482337
OBZG01000363
238945
Bacillota
GCC
Gly
>WENV180482341
OBZG01000376
412387
Bacillota
GCA
Cys
>WENV180482340
OBZG01000376
412387
Bacillota
GCA
Cys
>WENV180482346
OBZG01000393
149041
Bacillota
GTC
Asp
>WENV180482348
OBZG01000393
239832
Bacillota
TGT
Thr
>WENV180482361
OBZG01000423
267649
Bacillota
TAC
Val
>WENV180482367
OBZG01000432
338129
Bacillota
TGT
Thr
>WENV180482369
OBZG01000440
37213
Bacillota
TGA
Ser
>WENV180482388
OBZG01000475
152492
Bacillota
GGG
Pro
>WENV180482392
OBZG01000477
156937
Bacillota
GTG
His
>WENV180482390
OBZG01000477
419877
Bacillota
TCC
Gly
>WENV180482391
OBZG01000477
157635
Bacillota
TCT
Arg
>WENV180482398
OBZG01000484
245298
Bacillota
CGG
Pro
>WENV180482397
OBZG01000484
411547
Bacillota
CTG
Gln
>WENV180482409
OBZG01000518
147684
Bacillota
ACG
Arg
>WENV180482417
OBZG01000544
37269
Bacillota
TGA
Ser
>WENV180482419
OBZG01000553
59296
Bacillota
AAG
Leu
>WENV180482424
OBZG01000570
272488
Bacillota
GAA
Phe
>WENV180482433
OBZG01000579
182792
Bacillota
GTC
Asp
>WENV180482434
OBZG01000579
235079
Bacillota
GAA
Phe
>WENV180482431
OBZG01000579
235079
Bacillota
GAA
Phe
>WENV180482435
OBZG01000579
249259
Bacillota
GCC
Gly
>WENV180482432
OBZG01000579
249259
Bacillota
GCC
Gly
>WENV180482441
OBZG01000598
173314
Bacillota
GAT
Ile
>WENV180482444
OBZG01000603
338143
Bacillota
CTC
Glu
>WENV180482451
OBZG01000627
59296
Bacillota
AAG
Leu
>WENV180482459
OBZG01000637
238746
Bacillota
CGT
Thr
>WENV180482465
OBZG01000648
58712
Bacillota
CAG
Leu
>WENV180482506
OBZG01000859
37269
Bacillota
TGA
Ser
>WENV180482511
OBZG01000876
24650
Bacillota
TAA
Leu
>WENV180482509
OBZG01000876
144668
Bacillota
GTC
Asp
>WENV180482513
OBZG01000895
287000
Bacillota
GTT
Asn
>WENV180482517
OBZG01000895
144610
Bacillota
GTG
His
>WENV180482516
OBZG01000895
157635
Bacillota
TCT
Arg
>WENV180482521
OBZG01000903
58712
Bacillota
CAG
Leu
>WENV180482541
OBZG01001068
16842
Bacillota
CGA
Ser
>WENV180482543
OBZG01001074
44854
Bacillota
TGA
Ser
>WENV180482544
OBZG01001074
4624
Bacillota
GCT
Ser
>WENV180482548
OBZG01001100
235098
Bacillota
GAC
Val
>WENV180482549
OBZG01001121
10926
Bacillota
CGA
Ser
>WENV180482550
OBZG01001129
144612
Bacillota
TCT
Arg
>WENV180482552
OBZG01001133
18852
Bacillota
GCT
Ser
>WENV180482567
OBZG01001323
338128
Bacillota
TTC
Glu
>WENV180482569
OBZG01001330
144621
Bacillota
GTT
Asn
>WENV180482575
OBZG01001398
152491
Bacillota
CAT
Met
>WENV180482571
OBZG01001398
273029
Bacillota
TGT
Thr
>WENV180482574
OBZG01001398
281472
Bacillota
GGT
Thr
>WENV180482578
OBZG01001457
11034
Bacillota
GGA
Ser
>WENV180482579
OBZG01001475
37269
Bacillota
TGA
Ser
>WENV180482581
OBZG01001559
37213
Bacillota
TGA
Ser
>WENV180482587
OBZG01001743
147674
Bacillota
TCT
Arg
>WENV180482597
OBZG01001936
16834
Bacillota
GCT
Ser
>WENV180482598
OBZG01001944
272992
Bacillota
CTT
Lys
>WENV180482602
OBZG01001985
235098
Bacillota
GAC
Val
>WENV180482603
OBZG01002012
245296
Bacillota
CCC
Gly
>WENV180482612
OBZG01002183
342895
Bacillota
CAT
Met
>WENV180482616
OBZG01002251
235095
Bacillota
GGT
Thr
>WENV180482622
OBZG01002286
182792
Bacillota
GTC
Asp
>WENV180482632
OBZG01002662
37437
Bacillota
TAA
Leu
>WENV180482630
OBZG01002662
368876
Bacillota
GCC
Gly
>WENV180482637
OBZG01002689
18548
Bacillota
GCT
Ser
>WENV180482640
OBZG01002708
243612
Bacillota
TAC
Val
>WENV180482638
OBZG01002708
287034
Bacillota
GTT
Asn
>WENV180482641
OBZG01002711
411547
Bacillota
CTG
Gln
>WENV180482644
OBZG01002740
144594
Bacillota
CAC
Val
>WENV180482660
OBZG01002887
338149
Bacillota
CTC
Glu
>WENV180482661
OBZG01002887
144621
Bacillota
GTT
Asn
>WENV180482663
OBZG01002969
235638
Bacillota
GAA
Phe
>WENV180482667
OBZG01003173
235294
Bacillota
TGC
Ala
>WENV180482672
OBZG01003590
238945
Bacillota
GCC
Gly
>WENV180482673
OBZG01003598
148188
Bacillota
CCG
Arg
>WENV180482676
OBZG01003678
246023
Bacillota
TGC
Ala
>WENV180482688
OBZG01004295
258936
Bacillota
GGT
Thr
>WENV180482694
OBZG01004432
239020
Bacillota
TTT
Lys
>WENV180482697
OBZG01004656
235137
Bacillota
TGC
Ala
>WENV180482700
OBZG01004880
338152
Bacillota
TTC
Glu
>WENV180482703
OBZG01004880
144668
Bacillota
GTC
Asp
>WENV180482705
OBZG01004953
413657
Bacillota
CCC
Gly
>WENV180482715
OBZG01005368
144583
Bacillota
ACG
Arg
>WENV180482720
OBZG01005704
338131
Bacillota
GCC
Gly
>WENV180482738
OBZG01006860
114002
Bacillota
CAA
Leu
>WENV180482759
OBZG01008508
250349
Bacillota
GAA
Phe
>WENV180482758
OBZG01008508
235197
Bacillota
GTC
Asp
>WENV180482769
OBZG01009400
147135
Bacillota
ACG
Arg
>WENV180482770
OBZG01009435
413152
Bacillota
TCC
Gly
>WENV180482777
OBZG01009713
341763
Bacillota
CTC
Glu
>WENV180482795
OBZG01011071
361659
Bacillota
GCC
Gly
>WENV180482793
OBZG01011071
115075
Bacillota
TAG
Leu
>WENV180482789
OBZG01011071
150597
Bacillota
TCT
Arg
>WENV180482788
OBZG01011071
411739
Bacillota
TCC
Gly
>WENV180482792
OBZG01011071
237963
Bacillota
TTT
Lys
>WENV180482800
OBZG01011272
147639
Bacillota
ACG
Arg
>WENV180482813
OBZG01011810
194150
Bacillota
TGG
Pro
>WENV180482835
OBZG01013925
116171
Bacillota
TAG
Leu
>WENV180482833
OBZG01013925
356488
Bacillota
TGT
Thr
>WENV180482832
OBZG01013925
162003
Bacillota
GTC
Asp
>WENV180482834
OBZG01013925
102996
Bacillota
GTA
Tyr
>WENV180482829
OBZG01013925
338207
Bacillota
TTC
Glu
>WENV180482841
OBZG01015139
243647
Bacillota
TTT
Lys
>WENV180482840
OBZG01015139
243646
Bacillota
GTT
Asn
>WENV180482839
OBZG01015139
368876
Bacillota
GCC
Gly
>WENV180482850
OBZG01015920
235137
Bacillota
TGC
Ala
>WENV180482864
OBZG01019918
144767
Bacillota
GTG
His
>WENV180482863
OBZG01019918
163753
Bacillota
TGG
Pro
>WENV180482862
OBZG01019918
235292
Bacillota
CCA
Trp
>WENV180482868
OBZG01020917
113680
Bacillota
TAG
Leu
>WENV180482869
OBZG01020917
144762
Bacillota
TCT
Arg
>WENV180482896
OBZG01031133
186380
Bacillota
GTC
Asp
>WENV180482895
OBZG01031133
263765
Bacillota
TAC
Val
>WENV180482897
OBZG01031133
353527
Bacillota
TTC
Glu
>WENV180482906
OBZG01034392
243647
Bacillota
TTT
Lys
>WENV180482904
OBZG01034392
243613
Bacillota
GTG
His
>WENV180482905
OBZG01034392
343027
Bacillota
TTG
Gln
>WENV180482923
OBZG01050402
338550
Bacillota
>WENV180482924
OBZG01052761
368876
Bacillota
GCC
Gly
>WENV180482925
OBZG01052761
287034
Bacillota
GTT
Asn
>WENV180482927
OBZG01055932
18852
Bacillota
GCT
Ser
>WENV180482936
OBZG01059027
97943
Bacillota
GTA
Tyr
>WENV180482937
OBZG01059100
353527
Bacillota
TTC
Glu
>WENV180482940
OBZG01059677
272488
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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