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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
103 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180503489
OCAM01032424
179349
Bacillota
CAT
Met
>WENV180503449
OCAM01026127
280500
Bacillota
TGC
Ala
>WENV180503453
OCAM01026386
280428
Bacillota
GAA
Phe
>WENV180502617
OCAM01000116
291579
Bacillota
GAA
Phe
>WENV180502851
OCAM01000565
291579
Bacillota
GAA
Phe
>WENV180503567
OCAM01050648
120110
Bacillota
TAG
Leu
>WENV180502850
OCAM01000565
179917
Bacillota
CAT
Met
>WENV180503345
OCAM01015030
300819
Bacillota
TTT
Lys
>WENV180502894
OCAM01000685
183730
Bacillota
CAT
Met
>WENV180503486
OCAM01031801
399105
Bacillota
TTC
Glu
>WENV180502941
OCAM01000824
283762
Bacillota
CCT
Arg
>WENV180502508
OCAM01000022
184497
Bacillota
GGG
Pro
>WENV180503143
OCAM01002384
184497
Bacillota
GGG
Pro
>WENV180503000
OCAM01001167
184086
Bacillota
GTT
Asn
>WENV180502665
OCAM01000178
481167
Bacillota
GCA
Cys
>WENV180503127
OCAM01002131
295166
Bacillota
TGC
Ala
>WENV180503297
OCAM01011003
180747
Bacillota
TTT
Lys
>WENV180503425
OCAM01024181
179251
Bacillota
CAT
Met
>WENV180502978
OCAM01001090
73664
Bacillota
CAG
Leu
>WENV180503169
OCAM01003087
73664
Bacillota
CAG
Leu
>WENV180503622
OCAM01085407
280447
Bacillota
GAC
Val
>WENV180502917
OCAM01000753
186123
Bacillota
GTC
Asp
>WENV180503043
OCAM01001426
186123
Bacillota
GTC
Asp
>WENV180503442
OCAM01025879
186123
Bacillota
GTC
Asp
>WENV180503562
OCAM01049531
288819
Bacillota
GTG
His
>WENV180503597
OCAM01064355
189473
Bacillota
GAT
Ile
>WENV180503496
OCAM01032725
280997
Bacillota
CGT
Thr
>WENV180503613
OCAM01079785
407726
Bacillota
CTG
Gln
>WENV180503469
OCAM01028594
180781
Bacillota
TCT
Arg
>WENV180503524
OCAM01042030
291581
Bacillota
CGG
Pro
>WENV180503422
OCAM01023778
398835
Bacillota
GCC
Gly
>WENV180503644
OCAM01102673
21311
Bacillota
GCT
Ser
>WENV180502787
OCAM01000406
283760
Bacillota
GGT
Thr
>WENV180503194
OCAM01004056
284627
Bacillota
GAA
Phe
>WENV180503044
OCAM01001426
291634
Bacillota
GAA
Phe
>WENV180503443
OCAM01025879
291634
Bacillota
GAA
Phe
>WENV180502698
OCAM01000221
284016
Bacillota
CTT
Lys
>WENV180502898
OCAM01000685
20460
Bacillota
GCT
Ser
>WENV180503321
OCAM01012447
20250
Bacillota
GCT
Ser
>WENV180503369
OCAM01016356
99888
Bacillota
GTA
Tyr
>WENV180503459
OCAM01026970
180748
Bacillota
GAT
Ile
>WENV180503523
OCAM01042030
480322
Bacillota
CTG
Gln
>WENV180503495
OCAM01032725
280996
Bacillota
GTT
Asn
>WENV180502755
OCAM01000326
401685
Bacillota
TTG
Gln
>WENV180503366
OCAM01015976
175868
Bacillota
GTT
Asn
>WENV180502495
OCAM01000014
29760
Bacillota
CGA
Ser
>WENV180503215
OCAM01004780
398854
Bacillota
CTC
Glu
>WENV180503529
OCAM01043189
291576
Bacillota
CCC
Gly
>WENV180503170
OCAM01003123
400614
Bacillota
CCG
Arg
>WENV180503432
OCAM01024223
400963
Bacillota
GTT
Asn
>WENV180503492
OCAM01032424
183953
Bacillota
GTC
Asp
>WENV180503497
OCAM01032738
285608
Bacillota
CCT
Arg
>WENV180503100
OCAM01001938
175899
Bacillota
GTC
Asp
>WENV180503632
OCAM01092295
303718
Bacillota
TGT
Thr
>WENV180502666
OCAM01000178
178972
Bacillota
TCT
Arg
>WENV180503448
OCAM01025920
292374
Bacillota
TGC
Ala
>WENV180502653
OCAM01000164
398857
Bacillota
TTC
Glu
>WENV180503354
OCAM01015208
398857
Bacillota
TTC
Glu
>WENV180502721
OCAM01000263
100225
Bacillota
CAG
Leu
>WENV180502492
OCAM01000014
20461
Bacillota
GGA
Ser
>WENV180503200
OCAM01004151
291597
Bacillota
TGC
Ala
>WENV180503561
OCAM01049531
482411
Bacillota
CCA
Trp
>WENV180503017
OCAM01001227
289745
Bacillota
TTT
Lys
>WENV180502619
OCAM01000116
58120
Bacillota
AAG
Leu
>WENV180502745
OCAM01000316
58120
Bacillota
AAG
Leu
>WENV180503106
OCAM01001965
58120
Bacillota
AAG
Leu
>WENV180503178
OCAM01003388
58120
Bacillota
AAG
Leu
>WENV180503283
OCAM01008796
198522
Bacillota
GAT
Ile
>WENV180503412
OCAM01022306
198522
Bacillota
GAT
Ile
>WENV180502494
OCAM01000014
283761
Bacillota
CGT
Thr
>WENV180503359
OCAM01015208
46835
Bacillota
TAA
Leu
>WENV180502458
OCAM01000003
118669
Bacillota
GTA
Tyr
>WENV180502503
OCAM01000020
118669
Bacillota
GTA
Tyr
>WENV180503357
OCAM01015208
175915
Bacillota
GTC
Asp
>WENV180503140
OCAM01002328
175915
Bacillota
GTC
Asp
>WENV180502688
OCAM01000198
46821
Bacillota
TAA
Leu
>WENV180503553
OCAM01048561
294275
Bacillota
TGC
Ala
>WENV180502976
OCAM01001026
74812
Bacillota
TAA
Leu
>WENV180503346
OCAM01015030
120847
Bacillota
TAG
Leu
>WENV180502455
OCAM01000002
398852
Bacillota
CTC
Glu
>WENV180502456
OCAM01000002
398852
Bacillota
CTC
Glu
>WENV180502457
OCAM01000002
398852
Bacillota
CTC
Glu
>WENV180503396
OCAM01019527
399107
Bacillota
>WENV180503318
OCAM01012400
285609
Bacillota
AGT
Thr
>WENV180503447
OCAM01025920
201856
Bacillota
GAT
Ile
>WENV180503147
OCAM01002468
289123
Bacillota
GGT
Thr
>WENV180503493
OCAM01032424
285610
Bacillota
GAA
Phe
>WENV180502715
OCAM01000259
184084
Bacillota
CAT
Met
>WENV180503490
OCAM01032424
8520
Bacillota
>WENV180502963
OCAM01000975
184539
Bacillota
TCT
Arg
>WENV180503251
OCAM01006338
285601
Bacillota
TTC
Glu
>WENV180503468
OCAM01028475
285601
Bacillota
TTC
Glu
>WENV180502574
OCAM01000066
175857
Bacillota
GTG
His
>WENV180502754
OCAM01000326
175857
Bacillota
GTG
His
>WENV180503627
OCAM01091075
141184
Bacillota
GTA
Tyr
>WENV180503386
OCAM01017927
285611
Bacillota
CTT
Lys
>WENV180503604
OCAM01070719
175849
Bacillota
GTC
Asp
>WENV180503233
OCAM01005345
280486
Bacillota
TGC
Ala
>WENV180503478
OCAM01029997
280486
Bacillota
TGC
Ala
>WENV180502858
OCAM01000579
405393
Bacillota
GCC
Gly
>WENV180502918
OCAM01000753
405393
Bacillota
GCC
Gly
>WENV180503444
OCAM01025879
405393
Bacillota
GCC
Gly
>WENV180502493
OCAM01000014
47133
Bacillota
AAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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