This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
96 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180534696
OCHM01040084
405363
Bacillota
GCA
Cys
>WENV180534737
OCHM01047563
280428
Bacillota
GAA
Phe
>WENV180534269
OCHM01002722
291579
Bacillota
GAA
Phe
>WENV180534402
OCHM01006213
291579
Bacillota
GAA
Phe
>WENV180534089
OCHM01000844
302145
Bacillota
GAA
Phe
>WENV180534857
OCHM01087645
280466
Bacillota
TAC
Val
>WENV180534469
OCHM01010430
280492
Bacillota
CTT
Lys
>WENV180534631
OCHM01028217
175842
Bacillota
CAC
Val
>WENV180534217
OCHM01001729
184497
Bacillota
GGG
Pro
>WENV180534984
OCHM01194548
179176
Bacillota
ACG
Arg
>WENV180534163
OCHM01001198
295166
Bacillota
TGC
Ala
>WENV180534671
OCHM01034616
295166
Bacillota
TGC
Ala
>WENV180534872
OCHM01096711
295166
Bacillota
TGC
Ala
>WENV180534409
OCHM01006391
190476
Bacillota
CAT
Met
>WENV180534738
OCHM01048102
280447
Bacillota
GAC
Val
>WENV180534505
OCHM01013090
5692
Bacillota
GCT
Ser
>WENV180533746
OCHM01000101
186123
Bacillota
GTC
Asp
>WENV180533792
OCHM01000140
186123
Bacillota
GTC
Asp
>WENV180534132
OCHM01001002
186123
Bacillota
GTC
Asp
>WENV180534893
OCHM01103831
175825
Bacillota
GAT
Ile
>WENV180534621
OCHM01025978
73009
Bacillota
CAG
Leu
>WENV180534346
OCHM01004179
481217
Bacillota
GCA
Cys
>WENV180534524
OCHM01014232
407726
Bacillota
CTG
Gln
>WENV180534941
OCHM01140501
291581
Bacillota
CGG
Pro
>WENV180534622
OCHM01026058
175859
Bacillota
TCT
Arg
>WENV180534892
OCHM01103831
280436
Bacillota
TGC
Ala
>WENV180533930
OCHM01000336
21311
Bacillota
GCT
Ser
>WENV180534192
OCHM01001449
21311
Bacillota
GCT
Ser
>WENV180534650
OCHM01030581
175831
Bacillota
ACG
Arg
>WENV180534581
OCHM01019899
187589
Bacillota
CAT
Met
>WENV180534447
OCHM01008499
284627
Bacillota
GAA
Phe
>WENV180534463
OCHM01010053
284627
Bacillota
GAA
Phe
>WENV180533793
OCHM01000140
291634
Bacillota
GAA
Phe
>WENV180534133
OCHM01001002
291634
Bacillota
GAA
Phe
>WENV180534982
OCHM01189885
195824
Bacillota
GAT
Ile
>WENV180534985
OCHM01196462
404091
Bacillota
TTG
Gln
>WENV180534973
OCHM01173080
480322
Bacillota
CTG
Gln
>WENV180534169
OCHM01001218
401685
Bacillota
TTG
Gln
>WENV180534719
OCHM01043214
175868
Bacillota
GTT
Asn
>WENV180534829
OCHM01081769
398854
Bacillota
CTC
Glu
>WENV180534846
OCHM01084980
291576
Bacillota
CCC
Gly
>WENV180534006
OCHM01000569
287280
Bacillota
TGT
Thr
>WENV180534674
OCHM01034712
480324
Bacillota
TTG
Gln
>WENV180534855
OCHM01087476
175899
Bacillota
GTC
Asp
>WENV180534310
OCHM01003496
303718
Bacillota
TGT
Thr
>WENV180533807
OCHM01000163
73638
Bacillota
AAG
Leu
>WENV180533809
OCHM01000163
73638
Bacillota
AAG
Leu
>WENV180534588
OCHM01021084
56079
Bacillota
AAG
Leu
>WENV180534614
OCHM01024943
175911
Bacillota
GTC
Asp
>WENV180534548
OCHM01016333
186051
Bacillota
GAT
Ile
>WENV180534492
OCHM01011767
398857
Bacillota
TTC
Glu
>WENV180534859
OCHM01087645
280444
Bacillota
GGT
Thr
>WENV180534994
OCHM01205961
291597
Bacillota
TGC
Ala
>WENV180533905
OCHM01000279
289745
Bacillota
TTT
Lys
>WENV180534566
OCHM01018371
281445
Bacillota
GTG
His
>WENV180534464
OCHM01010104
179755
Bacillota
CCG
Arg
>WENV180533971
OCHM01000444
58120
Bacillota
AAG
Leu
>WENV180534086
OCHM01000822
58120
Bacillota
AAG
Leu
>WENV180533818
OCHM01000172
198522
Bacillota
GAT
Ile
>WENV180533819
OCHM01000172
198522
Bacillota
GAT
Ile
>WENV180533821
OCHM01000172
198522
Bacillota
GAT
Ile
>WENV180533822
OCHM01000172
198522
Bacillota
GAT
Ile
>WENV180533996
OCHM01000537
198522
Bacillota
GAT
Ile
>WENV180534323
OCHM01003728
198522
Bacillota
GAT
Ile
>WENV180534986
OCHM01196462
289761
Bacillota
TTT
Lys
>WENV180534152
OCHM01001128
46835
Bacillota
TAA
Leu
>WENV180534475
OCHM01010833
46835
Bacillota
TAA
Leu
>WENV180534410
OCHM01006391
398832
Bacillota
TTC
Glu
>WENV180534150
OCHM01001128
175915
Bacillota
GTC
Asp
>WENV180535016
OCHM01209141
175915
Bacillota
GTC
Asp
>WENV180534137
OCHM01001045
280476
Bacillota
TTT
Lys
>WENV180534335
OCHM01004037
280476
Bacillota
TTT
Lys
>WENV180534426
OCHM01007405
280476
Bacillota
TTT
Lys
>WENV180534639
OCHM01029840
280462
Bacillota
GAA
Phe
>WENV180534451
OCHM01008766
201856
Bacillota
GAT
Ile
>WENV180534787
OCHM01069015
289123
Bacillota
GGT
Thr
>WENV180533899
OCHM01000263
184539
Bacillota
TCT
Arg
>WENV180534945
OCHM01146994
280483
Bacillota
GAA
Phe
>WENV180534684
OCHM01036528
298260
Bacillota
GTT
Asn
>WENV180534198
OCHM01001501
285601
Bacillota
TTC
Glu
>WENV180534168
OCHM01001218
175857
Bacillota
GTG
His
>WENV180534800
OCHM01073880
175857
Bacillota
GTG
His
>WENV180534751
OCHM01054985
285756
Bacillota
GCC
Gly
>WENV180534849
OCHM01085606
398833
Bacillota
TGT
Thr
>WENV180534923
OCHM01118469
285556
Bacillota
TGT
Thr
>WENV180534858
OCHM01087645
175849
Bacillota
GTC
Asp
>WENV180534821
OCHM01079394
179166
Bacillota
TCT
Arg
>WENV180534634
OCHM01028561
280486
Bacillota
TGC
Ala
>WENV180534723
OCHM01043735
280486
Bacillota
TGC
Ala
>WENV180534805
OCHM01074995
280486
Bacillota
TGC
Ala
>WENV180534809
OCHM01076005
280486
Bacillota
TGC
Ala
>WENV180533747
OCHM01000101
405393
Bacillota
GCC
Gly
>WENV180533794
OCHM01000140
405393
Bacillota
GCC
Gly
>WENV180533966
OCHM01000428
405393
Bacillota
GCC
Gly
>WENV180534504
OCHM01013090
56074
Bacillota
TGA
Ser
>WENV180534836
OCHM01082316
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK