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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180560270
OCKF01000140
313104
Bacillota
TAC
Val
>WENV180560271
OCKF01000140
392638
Bacillota
TGT
Thr
>WENV180560274
OCKF01000186
10560
Bacillota
GGA
Ser
>WENV180560276
OCKF01000230
436750
Bacillota
TCC
Gly
>WENV180560278
OCKF01000230
392638
Bacillota
TGT
Thr
>WENV180560279
OCKF01000230
110221
Bacillota
GTA
Tyr
>WENV180560280
OCKF01000230
118077
Bacillota
>WENV180560281
OCKF01000230
338208
Bacillota
>WENV180560282
OCKF01000230
144762
Bacillota
TCT
Arg
>WENV180560286
OCKF01000254
16235
Bacillota
>WENV180560287
OCKF01000259
44874
Bacillota
CAA
Leu
>WENV180560289
OCKF01000261
144767
Bacillota
GTG
His
>WENV180560293
OCKF01000296
118077
Bacillota
>WENV180560296
OCKF01000336
392638
Bacillota
TGT
Thr
>WENV180560313
OCKF01002021
314670
Bacillota
GAA
Phe
>WENV180560316
OCKF01002175
319167
Bacillota
CAT
Met
>WENV180560324
OCKF01003493
199895
Bacillota
GTC
Asp
>WENV180560328
OCKF01003576
42270
Bacillota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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