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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
123 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180758245
ODHW01011982
212982
Bacillota
ACG
Arg
>WENV180757467
ODHW01000442
184537
Bacillota
ACG
Arg
>WENV180757234
ODHW01000129
221826
Bacillota
ACG
Arg
>WENV180757816
ODHW01002194
231532
Bacillota
ACG
Arg
>WENV180757276
ODHW01000165
141202
Bacillota
CAA
Leu
>WENV180758182
ODHW01009307
141202
Bacillota
CAA
Leu
>WENV180757837
ODHW01002345
104114
Bacillota
CAG
Leu
>WENV180758092
ODHW01006036
100945
Bacillota
CAG
Leu
>WENV180757321
ODHW01000212
187458
Bacillota
CAT
Met
>WENV180758000
ODHW01004130
187458
Bacillota
CAT
Met
>WENV180757883
ODHW01002904
183993
Bacillota
CAT
Met
>WENV180757998
ODHW01004130
356355
Bacillota
CAT
Met
>WENV180758203
ODHW01010652
356355
Bacillota
CAT
Met
>WENV180758391
ODHW01030501
184495
Bacillota
CAT
Met
>WENV180758054
ODHW01005398
187364
Bacillota
CAT
Met
>WENV180757166
ODHW01000068
289121
Bacillota
CCA
Trp
>WENV180757841
ODHW01002389
482593
Bacillota
CCC
Gly
>WENV180757850
ODHW01002554
482593
Bacillota
CCC
Gly
>WENV180757493
ODHW01000501
482078
Bacillota
CCC
Gly
>WENV180757251
ODHW01000141
402739
Bacillota
CCG
Arg
>WENV180757448
ODHW01000395
183957
Bacillota
CCT
Arg
>WENV180757399
ODHW01000319
47166
Bacillota
CGA
Ser
>WENV180757387
ODHW01000292
20943
Bacillota
CGA
Ser
>WENV180758247
ODHW01012120
20943
Bacillota
CGA
Ser
>WENV180757457
ODHW01000419
403759
Bacillota
CTC
Glu
>WENV180757458
ODHW01000419
403759
Bacillota
CTC
Glu
>WENV180757208
ODHW01000101
287380
Bacillota
CTT
Lys
>WENV180758084
ODHW01006036
287380
Bacillota
CTT
Lys
>WENV180757241
ODHW01000132
289154
Bacillota
CTT
Lys
>WENV180757371
ODHW01000274
338033
Bacillota
GAA
Phe
>WENV180758087
ODHW01006036
338033
Bacillota
GAA
Phe
>WENV180758091
ODHW01006036
110240
Bacillota
GAG
Leu
>WENV180758093
ODHW01006036
110240
Bacillota
GAG
Leu
>WENV180757474
ODHW01000463
408526
Bacillota
GCA
Cys
>WENV180757367
ODHW01000273
489283
Bacillota
GCA
Cys
>WENV180757266
ODHW01000160
452735
Bacillota
GCC
Gly
>WENV180757366
ODHW01000273
452735
Bacillota
GCC
Gly
>WENV180757524
ODHW01000577
452735
Bacillota
GCC
Gly
>WENV180757550
ODHW01000619
452735
Bacillota
GCC
Gly
>WENV180758243
ODHW01011982
455891
Bacillota
GCC
Gly
>WENV180757441
ODHW01000380
445407
Bacillota
GCC
Gly
>WENV180757473
ODHW01000463
445407
Bacillota
GCC
Gly
>WENV180757579
ODHW01000710
445407
Bacillota
GCC
Gly
>WENV180758442
ODHW01042313
445407
Bacillota
GCC
Gly
>WENV180758517
ODHW01066774
445407
Bacillota
GCC
Gly
>WENV180757102
ODHW01000035
283367
Bacillota
GCC
Gly
>WENV180756986
ODHW01000005
444984
Bacillota
GCC
Gly
>WENV180758043
ODHW01004996
20932
Bacillota
GCT
Ser
>WENV180758099
ODHW01006232
20932
Bacillota
GCT
Ser
>WENV180757326
ODHW01000219
20942
Bacillota
GGA
Ser
>WENV180757449
ODHW01000396
20942
Bacillota
GGA
Ser
>WENV180757451
ODHW01000406
183995
Bacillota
GGG
Pro
>WENV180758390
ODHW01030501
296855
Bacillota
GGT
Thr
>WENV180757882
ODHW01002904
289149
Bacillota
GGT
Thr
>WENV180758039
ODHW01004840
510876
Bacillota
GGT
Thr
>WENV180758055
ODHW01005412
510876
Bacillota
GGT
Thr
>WENV180757320
ODHW01000212
100696
Bacillota
GTA
Tyr
>WENV180757999
ODHW01004130
100696
Bacillota
GTA
Tyr
>WENV180758204
ODHW01010652
100696
Bacillota
GTA
Tyr
>WENV180757327
ODHW01000221
141141
Bacillota
GTA
Tyr
>WENV180758466
ODHW01049562
283303
Bacillota
GTC
Asp
>WENV180757370
ODHW01000274
179935
Bacillota
GTC
Asp
>WENV180758086
ODHW01006036
179935
Bacillota
GTC
Asp
>WENV180757439
ODHW01000380
280547
Bacillota
GTC
Asp
>WENV180757471
ODHW01000463
280547
Bacillota
GTC
Asp
>WENV180758506
ODHW01065035
280547
Bacillota
GTC
Asp
>WENV180757165
ODHW01000068
287508
Bacillota
GTG
His
>WENV180758342
ODHW01021747
289716
Bacillota
GTG
His
>WENV180757267
ODHW01000160
289147
Bacillota
GTT
Asn
>WENV180757945
ODHW01003431
293309
Bacillota
GTT
Asn
>WENV180758443
ODHW01042313
293309
Bacillota
GTT
Asn
>WENV180757580
ODHW01000710
293309
Bacillota
GTT
Asn
>WENV180757235
ODHW01000130
333281
Bacillota
GTT
Asn
>WENV180758064
ODHW01005585
289124
Bacillota
GTT
Asn
>WENV180758081
ODHW01006036
289124
Bacillota
GTT
Asn
>WENV180758239
ODHW01011982
288834
Bacillota
TAC
Val
>WENV180757237
ODHW01000130
287643
Bacillota
TAC
Val
>WENV180757271
ODHW01000160
287643
Bacillota
TAC
Val
>WENV180758085
ODHW01006036
287643
Bacillota
TAC
Val
>WENV180757496
ODHW01000502
289715
Bacillota
TAC
Val
>WENV180757865
ODHW01002691
289715
Bacillota
TAC
Val
>WENV180758172
ODHW01008742
289715
Bacillota
TAC
Val
>WENV180758421
ODHW01038534
289715
Bacillota
TAC
Val
>WENV180758441
ODHW01042313
289715
Bacillota
TAC
Val
>WENV180757468
ODHW01000442
119459
Bacillota
TAG
Leu
>WENV180757751
ODHW01001655
119459
Bacillota
TAG
Leu
>WENV180757385
ODHW01000292
480337
Bacillota
TCC
Gly
>WENV180757090
ODHW01000026
183994
Bacillota
TCT
Arg
>WENV180757386
ODHW01000292
184539
Bacillota
TCT
Arg
>WENV180757600
ODHW01000778
48505
Bacillota
TGA
Ser
>WENV180758053
ODHW01005359
48505
Bacillota
TGA
Ser
>WENV180758406
ODHW01033880
52748
Bacillota
TGA
Ser
>WENV180758146
ODHW01007903
280500
Bacillota
TGC
Ala
>WENV180758360
ODHW01023361
280500
Bacillota
TGC
Ala
>WENV180758296
ODHW01015688
295166
Bacillota
TGC
Ala
>WENV180758340
ODHW01021514
339995
Bacillota
TGC
Ala
>WENV180758399
ODHW01032240
339995
Bacillota
TGC
Ala
>WENV180758458
ODHW01045744
339995
Bacillota
TGC
Ala
>WENV180758484
ODHW01055755
339995
Bacillota
TGC
Ala
>WENV180758523
ODHW01070734
339995
Bacillota
TGC
Ala
>WENV180757452
ODHW01000411
323864
Bacillota
TGC
Ala
>WENV180758259
ODHW01013245
323864
Bacillota
TGC
Ala
>WENV180758438
ODHW01041767
280486
Bacillota
TGC
Ala
>WENV180757088
ODHW01000026
208539
Bacillota
TGG
Pro
>WENV180757384
ODHW01000292
208539
Bacillota
TGG
Pro
>WENV180757770
ODHW01001866
332181
Bacillota
TGT
Thr
>WENV180757787
ODHW01001949
289713
Bacillota
TGT
Thr
>WENV180757236
ODHW01000130
405874
Bacillota
TTC
Glu
>WENV180757270
ODHW01000160
405874
Bacillota
TTC
Glu
>WENV180757369
ODHW01000274
409321
Bacillota
TTC
Glu
>WENV180757495
ODHW01000502
432453
Bacillota
TTC
Glu
>WENV180757864
ODHW01002691
432453
Bacillota
TTC
Glu
>WENV180758171
ODHW01008742
432453
Bacillota
TTC
Glu
>WENV180758420
ODHW01038534
432453
Bacillota
TTC
Glu
>WENV180758440
ODHW01042313
432453
Bacillota
TTC
Glu
>WENV180758276
ODHW01014447
398857
Bacillota
TTC
Glu
>WENV180758343
ODHW01021747
404091
Bacillota
TTG
Gln
>WENV180757223
ODHW01000117
403766
Bacillota
TTG
Gln
>WENV180758241
ODHW01011982
301649
Bacillota
TTT
Lys
>WENV180757581
ODHW01000710
289761
Bacillota
TTT
Lys
>WENV180758344
ODHW01021747
289761
Bacillota
TTT
Lys
>WENV180758419
ODHW01038534
289761
Bacillota
TTT
Lys
>WENV180758507
ODHW01065105
289761
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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